Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1014 | ATGTTTGTCGCGATTATTTCACACTTCAACACCCTGATCACGATCGATAGCCATCTCACGCCGCATACAAAGACAGTTTTGCCCTTCGCCAATTTCTCTCATGTCTGGTCGCGATTTTCGATCAAAAATCGCGATAAACACTTGGTCCATACTCGCGACAAGCAGTTGGTTGATAATCGTGACAAGCAGACAGTAGAAACTCGCGACAAGAAGTGGGTGCAAAATGGAGGAGGACAAAAACGTCTTTCTACGCGGCGTGAAGTGTCTAGCGATCGTGATCCAGATTTCGGTGCCACTGCCACCCCTCCTTTCTCACATATTTATATATATCTCCTCTCTTCTTCAACCAAAATCCCATTCACTTTCAGACAGATGTTCAACTCCGATTGCCACACCTTCTCGCCGGTCTCCACTCCGGCGAGTCGGGTTGATGATTTTCAGGATCTTCTTGCCTCTGCTGGGTTGCCTACCTCACCGGAGTTTCGAATCAATCTGCCTCTATCAACCACGGCCACCTCGACATGCTCGCCTCCACCCGAGGCGAACTCCACGATCGCGGGAGAGATTCCGAAGAAGAGAAAAGCGAAGAATAACAAAGAAGTGAAATCGAGCAGAGAGAAGAGAATCAAACCAATGATTGAAGAAGAAGAAGAAGATGAAAAATCAAAGATAACAGAGGAAACAGAGAGATCAAAAGCGGATTATGTTCATGTACGAGCACGTCGAGGGCAGGCCACAGACAGCCATAGTCTTGCAGAAAGAGCGAGGAGAGAAAAAATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTACCTGGTTGTAACAAAATCGCTGGGAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTTCAGCAACAAGTGGAGTTCTTATCAATGAAGTTGGCTACTTTGAATCCCAGACATGTCGATGACCTCTTTGCCAAACAGGTGTTACCGACGATAGAAGTCTCACCGGAAACGGCTAATTCTTCATCCTACTTTAACCAACTCGGAATCGGCTCAAGCTCTGTAACAATCCCAGAAACTCCATTGATCAACACAGCTTCTATTACTCATTTCGAGCTCTCTTCAACTTGGGGAGAAGATTTACAGAGCCTTTATAGCATGAGCTTTGAACAAGGAGGGCCGCCATTGTTGTCGCCATCGAGCTTTTTATCGCAGCAATATTCAGGCATTGAAGATGAAAACGAAACATTTGTAGACGACAAAGTTGTTGTTCCATTTTAA | 1260 | 44.76 | MFVAIISHFNTLITIDSHLTPHTKTVLPFANFSHVWSRFSIKNRDKHLVHTRDKQLVDNRDKQTVETRDKKWVQNGGGQKRLSTRREVSSDRDPDFGATATPPFSHIYIYLLSSSTKIPFTFRQMFNSDCHTFSPVSTPASRVDDFQDLLASAGLPTSPEFRINLPLSTTATSTCSPPPEANSTIAGEIPKKRKAKNNKEVKSSREKRIKPMIEEEEEDEKSKITEETERSKADYVHVRARRGQATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFLSMKLATLNPRHVDDLFAKQVLPTIEVSPETANSSSYFNQLGIGSSSVTIPETPLINTASITHFELSSTWGEDLQSLYSMSFEQGGPPLLSPSSFLSQQYSGIEDENETFVDDKVVVPF | 419 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9657898 | 9661882 | - | Hsped.08g10140.1 | Hepe08g1014 | 576986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1014 | 419 | CDD | bHLH_AtBPE_like | 234 | 316 | - | - | |
Hepe08g1014 | 419 | MobiDBLite | consensus disorder prediction | 59 | 75 | - | - | |
Hepe08g1014 | 419 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 184 | 342 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Hepe08g1014 | 419 | SMART | finulus | 250 | 300 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g1014 | 419 | Pfam | Helix-loop-helix DNA-binding domain | 248 | 295 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g1014 | 419 | MobiDBLite | consensus disorder prediction | 192 | 230 | - | - | |
Hepe08g1014 | 419 | Gene3D | - | 241 | 314 | IPR036638 | GO:0046983(InterPro) | |
Hepe08g1014 | 419 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 242 | 311 | IPR036638 | GO:0046983(InterPro) | |
Hepe08g1014 | 419 | FunFam | Basic helix-loop-helix transcription factor | 241 | 314 | - | - | |
Hepe08g1014 | 419 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 244 | 294 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g1014 | 419 | MobiDBLite | consensus disorder prediction | 59 | 97 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g1014 | Hepe-Chr8:9657898 | Hepe10g1832 | Hepe-Chr10:55051312 | 7.72e-37 | dispersed | |
Hepe07g2084 | Hepe-Chr7:65134691 | Hepe08g1014 | Hepe-Chr8:9657898 | 7.95e-36 | transposed | |
Hepe02g0492 | Hepe-Chr2:4842224 | Hepe08g1014 | Hepe-Chr8:9657898 | 4.89e-53 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56179 | PF00010 | HLH | 3.60E-06 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1014 | - | - | - | 0.0 |