Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1048 ATGGCTGGGATTCTGAAAAAGTTTTTTCACGAGAAGCCTTCTTCTCCTGTTAGTGATCAGGATTTTAACCCTGAATATTCTTTTGCAATCGAGTATACAGGTCCTGGAATCACTTACGAGATTCCTCGTGCTGTTCCTATCAATGTCGATTATATTCCAACTGCTTCTGTAGTTGAGTTCAGGGATGATGTATCATCGCTGCCTGTGATACAACCCATCGTTGAGAAATTAAGGAGGGGCTCAAGTTCGAGCCCTAATTCTTTAACTTCTTCAACCTCAGAAGTCCAGGAAGATGGGCGTGTTTACATTGATGATAATAAGAAAGATAATGGGGAAGATGAATGTAATATCAATTCGTGTGATGGAATTGAAAGTTCTGGTGAACTTGAGAATTCCAATAAGGTAAAACGAAGATTAGAAAGCAGGTTAGAATCACTGGAAATTAAGAATGAAGAGGATTTTCAAGGTTACACGAATTCTAGCGATTCGGAATCGGAAGAATCGGGTTTGAGCTCGTCTTCTGAGATTTTTGCTGTAGAGGAAGGGGAAGTTGACAATGGAACTCAGCCTCTGCATGGCAGAAGGCCATCAGCTGTTACCTTCCTCGATCCCCATTCCAGCAACGCAATTTCTGAAGAAGCAGACTCGAGTCAATTTGAGACTGGAAGTATCCAAGAGATGCCAAGAGCTGAAAGGAAGGGGAAGAAAGGAACGTGCTACTACTGCCTTACAGGGAACCGTTTCACTGAAAAGGAAGTATGTATTGTTTGTGGAGCCAAGTATTGTATTGGATGTGTGATTAGAGCAATGGGATCTATGCCAGAAGGAAGAAAGTGTATCACTTGTATTGGCTTCAGGATTGATGAATCAAGAAGAGAGAACCTGGGTAAGTGCTCTAGAGTGCTCAAGAGGCTGTTTTCTGACTCGGAAGTTAATAGAGCAATGGCAGATGAAAAAGAATGTGAAATAAATCAGCTACCTGCAAGACTTATTTATGTCAATGACGATCCTTTGAGTCGACAAGAGCTGTTTATCTTGCGAAGTTGTCAAAAGCCACCAAAGAATCTAAAACCAGGACGATATTGGTATGACAAAGAATCAGGCTTCTGGGGAAAGGACGGACGTGGACCGATCCAGATAGTTAGCTCTCAGCTAGAAGTTGGAGGTCGGATCAAGAGGAATGCTAGCAATGGCAATACAAACGTGTGCATTAATAATCGAGAGATCACTAAAAATGAGCTTCGGATACTGAAGATGGCTGGAGTACCTTGTGAAGGAAGACCTTCGTTTTGGGTTAGTGCAGATGGAACATATCAGGAGGAGGGAATGAACAATGGGGGGAAAATATGGGACAAGACTAGAACGAAGCTTGCATGTGCCCTTTTTTCTTTGCCTATTCCTTCTAATTCTGTTCCCTCTGGAGGCAAAACAGTGCACAAAGATATCTCTGTTTCTCCCGAGCAGAAAATGCTTCATAAACTTCTACTTGTTGGCCATAAACAATCTGGCACGAGTACCATATTCAAGCAGGCCAAGCAAACATATAAAGTTCCTTTTTCTGACGAGGAGCGTCGAACCATTAAATTCCTTATTCAAAGGAAATTGTATTGGTATATTAGTATACTACTGGAAGGACGGGAACGTTTTGAAGAAGAAATTTTGATGGATAAGAAGAACAAGCAACCAGTGAATGATCCGTCCACCTCATCAGCATCAGGGAATGAAGTTCGGTTCGAGCGTAAAACCACCTACTCCCTTGGCCCTAAACTGAAAGTATTTGCAGATTGGCTTCTTCAAGTCGTGGTGTCAGGTAACTTCGAAACCATATTCCCGGCAGCTACCCGAGTGTATGCCCAATCAGTGGAAGAGTTATTGAAGGATGAAGCCTTTCAAGCCACATACAGTAGAAGGAATGAACTAGAAATGCTCCCAAGAGTTGCAACTTATTTCCTTGATCGGGCTGTTGACATTTCAAGTATAGAGTATGACCCTTCTGACAATGACATCTTGTATGCCGAGGGAGTCTCCTCATGTAACAGCCTCAGTAACATGGAGTTCTCGTTTCCCGAGTCACGACAAGACTCCATTCTTGATCCTCCTTACCAGCACGACTCGGCAATAAGGTACCAGCTGATTCGAGTCCATCCCAGTACTCTGGGAGAAAACTGCAAATGGTTGGAGATGTTTGAAGACATGAGCATTATCCTATTTTGCGTTTCTTTGACCGATTATGACGAATTTGACGAAGATGATAATGGAGTTTTTGTTAACCGGATGATCGCATGCAAGCAACTCTTCGAAAGCATCGTGACGCATCGAGCCTCGAGAGGGAAGAACTTCCTTCTCATACTCAACAAGTTTGATCTCTTTGAAGAAAAAATCATCCAGGTTCCTCTTGCCCAATGCGAGTGGTTCGACGACTTCAATCCAATGATCACTGCAAATTCAACTGGAAGAAGTAGCAGCAGCACGAACCCGACGTTGGCTCAACGAGCGTTTCAGTACATAGCAGTAAAATTCAAGAGATTGTTCTGTTCTCTGACAGACAAAAAGTTGTTTGTTTCACAGACTACAGGGATGGATCCTGAAAATGTCAATGCAGCTCTCAGATATGCAAGGGAGATAATCAAATGGCAAGTAGACAAACCTAACAACAGCATTACTGAAATTTCAAGTACCAGTGGTGATGCAAGCAGCTTCACATAG 2706 42.68 MAGILKKFFHEKPSSPVSDQDFNPEYSFAIEYTGPGITYEIPRAVPINVDYIPTASVVEFRDDVSSLPVIQPIVEKLRRGSSSSPNSLTSSTSEVQEDGRVYIDDNKKDNGEDECNINSCDGIESSGELENSNKVKRRLESRLESLEIKNEEDFQGYTNSSDSESEESGLSSSSEIFAVEEGEVDNGTQPLHGRRPSAVTFLDPHSSNAISEEADSSQFETGSIQEMPRAERKGKKGTCYYCLTGNRFTEKEVCIVCGAKYCIGCVIRAMGSMPEGRKCITCIGFRIDESRRENLGKCSRVLKRLFSDSEVNRAMADEKECEINQLPARLIYVNDDPLSRQELFILRSCQKPPKNLKPGRYWYDKESGFWGKDGRGPIQIVSSQLEVGGRIKRNASNGNTNVCINNREITKNELRILKMAGVPCEGRPSFWVSADGTYQEEGMNNGGKIWDKTRTKLACALFSLPIPSNSVPSGGKTVHKDISVSPEQKMLHKLLLVGHKQSGTSTIFKQAKQTYKVPFSDEERRTIKFLIQRKLYWYISILLEGRERFEEEILMDKKNKQPVNDPSTSSASGNEVRFERKTTYSLGPKLKVFADWLLQVVVSGNFETIFPAATRVYAQSVEELLKDEAFQATYSRRNELEMLPRVATYFLDRAVDISSIEYDPSDNDILYAEGVSSCNSLSNMEFSFPESRQDSILDPPYQHDSAIRYQLIRVHPSTLGENCKWLEMFEDMSIILFCVSLTDYDEFDEDDNGVFVNRMIACKQLFESIVTHRASRGKNFLLILNKFDLFEEKIIQVPLAQCEWFDDFNPMITANSTGRSSSSTNPTLAQRAFQYIAVKFKRLFCSLTDKKLFVSQTTGMDPENVNAALRYAREIIKWQVDKPNNSITEISSTSGDASSFT 901
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10094132 10098858 + Hsped.08g10480.1 Hepe08g1048 577020

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1048 901 FunFam Guanine nucleotide-binding protein G(k) subunit alpha 682 885 - -
Hepe08g1048 901 MobiDBLite consensus disorder prediction 152 173 - -
Hepe08g1048 901 Gene3D - 679 882 IPR027417 -
Hepe08g1048 901 SMART galpha_1 476 885 IPR001019 GO:0003924(InterPro)|GO:0007186(InterPro)|GO:0019001(InterPro)|GO:0031683(InterPro)
Hepe08g1048 901 ProSiteProfiles G-alpha domain profile. 490 887 IPR001019 GO:0003924(InterPro)|GO:0007186(InterPro)|GO:0019001(InterPro)|GO:0031683(InterPro)
Hepe08g1048 901 MobiDBLite consensus disorder prediction 78 97 - -
Hepe08g1048 901 Gene3D - 520 673 IPR011025 GO:0007165(InterPro)
Hepe08g1048 901 MobiDBLite consensus disorder prediction 78 134 - -
Hepe08g1048 901 CDD G-alpha 492 879 IPR001019 GO:0003924(InterPro)|GO:0007186(InterPro)|GO:0019001(InterPro)|GO:0031683(InterPro)
Hepe08g1048 901 PANTHER OS01G0977800 PROTEIN 11 466 IPR053057 -
Hepe08g1048 901 MobiDBLite consensus disorder prediction 98 115 - -
Hepe08g1048 901 Pfam G-protein alpha subunit 487 876 IPR001019 GO:0003924(InterPro)|GO:0007186(InterPro)|GO:0019001(InterPro)|GO:0031683(InterPro)
Hepe08g1048 901 Coils Coil 129 149 - -
Hepe08g1048 901 PRINTS Alpha G protein (transducin) signature 780 789 IPR001019 GO:0003924(InterPro)|GO:0007186(InterPro)|GO:0019001(InterPro)|GO:0031683(InterPro)
Hepe08g1048 901 PRINTS Alpha G protein (transducin) signature 493 508 IPR001019 GO:0003924(InterPro)|GO:0007186(InterPro)|GO:0019001(InterPro)|GO:0031683(InterPro)
Hepe08g1048 901 PRINTS Alpha G protein (transducin) signature 732 760 IPR001019 GO:0003924(InterPro)|GO:0007186(InterPro)|GO:0019001(InterPro)|GO:0031683(InterPro)
Hepe08g1048 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 879 IPR027417 -
Hepe08g1048 901 MobiDBLite consensus disorder prediction 150 173 - -
Hepe08g1048 901 SUPERFAMILY Transducin (alpha subunit), insertion domain 519 672 IPR011025 GO:0007165(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1048 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2571 Hepe-Chr7:70168328 Hepe08g1048 Hepe-Chr8:10094132 2.77e-212 dispersed
Hepe01g1922 Hepe-Chr1:84040819 Hepe08g1048 Hepe-Chr8:10094132 2.56e-40 transposed
Hepe04g1205 Hepe-Chr4:67353064 Hepe08g1048 Hepe-Chr8:10094132 8.70e-275 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g526 . Blo15g00719 . . Bpe07g00403 . . Bma12g00482 . . Cma02g00427 Cma20g00879 Car02g00284 Car20g00758 . . . . . . . . . . . . . . . . . Cone12ag1124 Cone8ag1168 . . Lsi10g00329 . Chy11g00419 . . . . . . . . . Sed05g3643 Cmo02g00428 Cmo20g00886 . . . . . Cpe05g01234 Bhi10g02061 Tan05g1365 Cmetu11g1444 . Hepe08g1048 . . Cla09g01736 Cam09g1830 Cec09g1890 Cco09g1983 . . Cre01g0680 . Csa02g01217 . Cme11g00480
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004689 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 4 1 42