Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g1059 | ATGGAGTACATATTATTTGATGCACAATCCCATTCCCAGCCCTTAAATGCTCATCCTCCGACAAGTCATGGTGCTACGCCAATGCCGCCCCCTCCCCCTGGATCAAAAGGGTCAAATGTACCACCGCCACCCCCTCCTTCTGTTGGAAGGGGGAAAGTTTCTCTAGGATCAACAACTCAAGGAAGAGGTCGAGTTGCTACGGGAGTTGTAAACGCTCCAAAGAAAACCACTTTAAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGCGGCAGCAAAGGTGGAGGACGACGTGGTTCCATCATCAACAAGCCTGAAAAAGTGCAACTGATTGACTTGCGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTGCCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCCCTTGATATTGATCAGGTTGAAAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAATGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGAATAGAATCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGAAATAATTTGAAAACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGAAAAATTGCGTCAGATAATGCAAACAATTCTTACACTGGGAAATGCGCTGAACCAGGGTACTGCTCGAGGTTCGGCTATAGGTTTTAAGCTGGACAGTCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGGAGTGA | 969 | 42.41 | MEYILFDAQSHSQPLNAHPPTSHGATPMPPPPPGSKGSNVPPPPPPSVGRGKVSLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSIINKPEKVQLIDLRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVNDLRNNLKTINDATREVKESEKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKE | 322 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 10221214 | 10227512 | + | Hsped.08g10590.1 | Hepe08g1059 | 577031 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g1059 | 322 | SMART | it6_source | 67 | 322 | IPR015425 | - | |
| Hepe08g1059 | 322 | MobiDBLite | consensus disorder prediction | 23 | 49 | - | - | |
| Hepe08g1059 | 322 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 81 | 321 | - | - | |
| Hepe08g1059 | 322 | PANTHER | FORMIN-J | 16 | 321 | IPR051144 | - | |
| Hepe08g1059 | 322 | Gene3D | Formin, FH2 domain | 69 | 322 | IPR042201 | - | |
| Hepe08g1059 | 322 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 68 | 322 | IPR015425 | - | |
| Hepe08g1059 | 322 | Coils | Coil | 246 | 266 | - | - | |
| Hepe08g1059 | 322 | Pfam | Formin Homology 2 Domain | 73 | 322 | IPR015425 | - | |
| Hepe08g1059 | 322 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe07g2489 | Hepe-Chr7:69234715 | Hepe08g1059 | Hepe-Chr8:10221214 | 1.02e-93 | dispersed | |
| Hepe08g1059 | Hepe-Chr8:10221214 | Hepe09g0582 | Hepe-Chr9:5428963 | 5.41e-107 | dispersed | |
| Hepe08g1059 | Hepe-Chr8:10221214 | Hepe09g0095 | Hepe-Chr9:754604 | 6.31e-101 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g1059 | K28090 | - | csv:101217517 | 489.96 |