Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1063 ATGCCTCCCAAAACTCTCATTATCCTCTCTTCTCTCTTCTTAAGTCTTCCCTTCTTCTTAACTCCATCCTCCTCTGCCCCTAATTATAATACTAACTTTCAGGAGGCTTACAATCAGCTCCATCCTAATTTTTACGACAAGTCCTGCCCCCGTTTGCCGATGATAATTCGGTATCGTGTTTGGGCTGCCGTCCAAAACGACTCGAGAATTGCTGCATCGCTGTTGCGGTTGCAATTTCATGACTGTGTTGTAGATGGATGTGATGCATCAGTCCTGCTTGACGATACTAAAGACATGAAAGGTGAAAAAAACGCTCCGGGCAACATGAAATCGCTTCGAGGGTTTGAAGTGATAGATTCCATAAAAGTTGATGTAGAAACATATTGTCCAGAGACAGTTTCATGTGCTGATATAATAACTCTTGCAGCTAGAGAAGCTGTGTACCTGGTCGGAGGGCCATACTGGCACCTTCCGCTAGGACGTAGAGATGGTTTAACCGCTAGCAACAAATCAGTCTTGGAACAACTCCCATCCCCCAAGGCATCTCTAGAGAACAACACCGCGAAATTCACCTCAAAGGGCCTCGACTTAAAGGACCTCGTCGTGCTTTCAGGAGCCCACACCATCGGGTTTGCCCGGTGCGTGACATTCAAGCGCCGCCTCTTCAACTACAAGGGCTCCGGCCAACCCGACCCTGACTTAAACGCCGCCATGCTCTCCGATCTGCAGACCATGTGCCCCAACAGAAACGATGGCACCAACGCCAATTTGGCGCCGCTGGATGTGGCCAGTTACGACAAATTCGACAACGAGTATTATACGAATCTGATGAGCAGGGTGGGGCTTTTGGAGTCGGACACGAGTCTGATGGCGGACCCCGAGACGGCGCGGATGGTTAGAGAATACAGTTTTGATCCGAATCTGTTCTTCGATGACTTTGCGGAGTCGATGTTGAGGATGAGCTTGGTTGGGATTCTGACTGGCCGCGATGGGCAGATTCGAAAGGAATGTGGCGCTGTTAATGTTGATGATGGCTATTGA 1041 49.28 MPPKTLIILSSLFLSLPFFLTPSSSAPNYNTNFQEAYNQLHPNFYDKSCPRLPMIIRYRVWAAVQNDSRIAASLLRLQFHDCVVDGCDASVLLDDTKDMKGEKNAPGNMKSLRGFEVIDSIKVDVETYCPETVSCADIITLAAREAVYLVGGPYWHLPLGRRDGLTASNKSVLEQLPSPKASLENNTAKFTSKGLDLKDLVVLSGAHTIGFARCVTFKRRLFNYKGSGQPDPDLNAAMLSDLQTMCPNRNDGTNANLAPLDVASYDKFDNEYYTNLMSRVGLLESDTSLMADPETARMVREYSFDPNLFFDDFAESMLRMSLVGILTGRDGQIRKECGAVNVDDGY 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10324944 10326729 + Hsped.08g10630.1 Hepe08g1063 577035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1063 346 CDD secretory_peroxidase 39 340 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe08g1063 346 ProSiteProfiles Plant heme peroxidase family profile. 39 341 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601(InterPro)
Hepe08g1063 346 Gene3D Peroxidase, domain 2 177 320 - -
Hepe08g1063 346 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 FunFam Peroxidase 177 320 - -
Hepe08g1063 346 Gene3D - 43 341 - -
Hepe08g1063 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Hepe08g1063 346 PANTHER PEROXIDASE 72-RELATED 18 339 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 SUPERFAMILY Heme-dependent peroxidases 39 341 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 Pfam Peroxidase 57 303 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 FunFam Peroxidase 43 191 - -
Hepe08g1063 346 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe08g1063 346 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2075 Hepe-Chr7:65023743 Hepe08g1063 Hepe-Chr8:10324944 2.72e-69 dispersed
Hepe08g1063 Hepe-Chr8:10324944 Hepe10g1377 Hepe-Chr10:50136096 1.10e-81 dispersed
Hepe10g1607 Hepe-Chr10:52793251 Hepe08g1063 Hepe-Chr8:10324944 4.46e-74 transposed
Hepe04g1231 Hepe-Chr4:67683678 Hepe08g1063 Hepe-Chr8:10324944 2.34e-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1063 K00430 - csv:101209504 556.599