Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g1110 | ATGGAGATCTGGTTCATCATCCTTATCTCCCTCTCCATCTCTTATCTTCTCAGTTCCATTTTCACCAAATTCCAAAGCTCCACAAACCTCCCACCAGGCCCTCCTTCAATCCCAATCCTCTCCACTTTCCAATGGCTCCGGACATCACCTCTCCAAATGGAATCTCTCCTCCGCAGCGCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCCTTGGCCCTCGCCCGGCCATCTTCATCGCCGACCGCACCATTGCCCACAAGGCCCTCCTCCAAAACGGCGCTCTCTTCGCCGACCGCCCACCGGCTTCTCCCTTGTCCAAAATCCTCTCCAGCAACCAGCACAGCATCAACTCTGCCCCTTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACCTCCCAAATCCTCCATACTGCCCGTGTCAAATCCTACGGTCGTGCTCGCAAGTGGGTTTTGGATATTCTTATTAATCGGATTCTCGCTCACTCTGAATCGGGGACCCCCGTTTTTGTGATCCATCATTTTCAGTACTCCATGTTTTGTTTGTTGGTGTTGATGTGCTTTGGGGATAAGCTTGACGAACCTCAAATTAAAGAAGTCGAGAACGTGCAGCGTGCGATGCTTTTAAATTTTAGACGCTTTGGTCTCCTCAATTTATGGCCTAAATTGACCAAATTTGTTCTTCCTAGCCGCTGGGAGGAGTTTCTCCAACTAAGAAGGAACCAAGAGAGAGTCATAATTCCTCTGATCGAAGCAAGAAGGAAAGCCAACAAAAACAGAGGAAACAGAGAAAACAGAGAAGGTAAAGAAGAAGAAGAATTCGTGTTGTCATATGTGGATACACTCCTCGAATTACATCTCCCCGACGAGGACAACAGAAAGCTAACAGACGGCGAAATGGTCACTCTATGCTCGGAATTCCTCACCGGCGGCACCGATACCACATCCACAACCTTGCAGTGGACAATGGCGAATTTAGTGAAAAACCCAGAAATTCAAAACAAGCTTTATGCAGAGATCAAAGGAGCAATGGGAAATCGAGCGGGGGAGGAGGAGGTGAAGGAAGAGGATCTGGGGAAACTTCCATATTTGAAGGCGGTGGTTTTGGAAGGATTACGAATACACCCACCGGGGCATTTCCTACAACCACGAGCAGTGAAAGAGGATATAGAATTCGAAAACTACGTGATACCCAAAAACGGGACTGTAAATTTCATGGCGGCGGAGATGGGTCGGGATCCAGAAGTGTGGGAAGATCCGATGAGGTTTAAGCCGGAGAGGTTCGTGAAGGGCGGCGGAGAAGTGGCGGAGTTTGATGTAACAGGGAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGAATATGTCCTGGATATGGTTTGGGGATTCTTCATTTGGAATATTTCATAGCGAATTTGGTATGGAGGTTTGAGTGGAAGGCTATAGATGGGGACAATGTTGATCTCTCGGAGAAGATAGAGTTCACCTTTGTGATGAAAAATCCTCTGAAAGCCAACATAAGTTCGAGGTTTTAA | 1548 | 48.84 | MEIWFIILISLSISYLLSSIFTKFQSSTNLPPGPPSIPILSTFQWLRTSPLQMESLLRSAVAKYGPIVTLRLGPRPAIFIADRTIAHKALLQNGALFADRPPASPLSKILSSNQHSINSAPYGPLWRLLRRNLTSQILHTARVKSYGRARKWVLDILINRILAHSESGTPVFVIHHFQYSMFCLLVLMCFGDKLDEPQIKEVENVQRAMLLNFRRFGLLNLWPKLTKFVLPSRWEEFLQLRRNQERVIIPLIEARRKANKNRGNRENREGKEEEEFVLSYVDTLLELHLPDEDNRKLTDGEMVTLCSEFLTGGTDTTSTTLQWTMANLVKNPEIQNKLYAEIKGAMGNRAGEEEVKEEDLGKLPYLKAVVLEGLRIHPPGHFLQPRAVKEDIEFENYVIPKNGTVNFMAAEMGRDPEVWEDPMRFKPERFVKGGGEVAEFDVTGSKEIKMMPFGAGRRICPGYGLGILHLEYFIANLVWRFEWKAIDGDNVDLSEKIEFTFVMKNPLKANISSRF | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 10988414 | 10990474 | + | Hsped.08g11100.1 | Hepe08g1110 | 577082 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g1110 | 515 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | FunFam | Cytochrome P450 family protein | 24 | 515 | - | - | |
| Hepe08g1110 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe08g1110 | 515 | SUPERFAMILY | Cytochrome P450 | 31 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | CDD | CYP77_89 | 63 | 508 | - | - | |
| Hepe08g1110 | 515 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 14 | 513 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Hepe08g1110 | 515 | Gene3D | Cytochrome P450 | 23 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | Pfam | Cytochrome P450 | 31 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1110 | 515 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe08g1110 | Hepe-Chr8:10988414 | Hepe08g1112 | Hepe-Chr8:10998008 | 3.94e-258 | dispersed | |
| Hepe08g1109 | Hepe-Chr8:10981740 | Hepe08g1110 | Hepe-Chr8:10988414 | 1.14e-273 | tandem | |
| Hepe08g1110 | Hepe-Chr8:10988414 | Hepe08g1111 | Hepe-Chr8:10991559 | 4.70e-287 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g1110 | K24184 | - | csv:105434706 | 788.875 |