Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1120 ATGGACGCTCTCTTTGTCCCCATCACCTTCTCCGAACCTCCTCACTCTTTACTCACCCGTTCCACCTACGCCGGAGCTCAATCGAGGATTGGACCTGTTTCCCTCTTCTCCCCGCGTTCTTCTGTAATTCGGCTCAAGCGCTTTCCTATTCGCTGCAAGAAGTTTTCCTATCCTCGCTTCGGTCGCTTCCGTTGCGCCGTCGAGGCCTCCGATCATCGGCACGATCACCACCACCACCACCACCACCATGGCTGCCAGCACCATTGCGGTGGTGATGGTGATGGAGTGGAGCTGACTGGAGCTCAGAAGGCGTTTGTTCGATTTGCCGAAGCGATTAGGTGGACGGACTTGGCGAATTATTTGAGGGAGCATCTACACTTGTGTTGTGGTTCTGCTGCTTTGTTTGTGACTGCGGCTGCGTGTCCTTATTTGGTGCCTAAACCTGCTGTGAAGCCTTTACAGAATGTTTTCATTGCTGTTGCTTTTCCTTTAGTCGGGGTATCTGCTTCTCTTGATGCTCTTACTGATATTAGTGGTGGGAAAGTAAACATCCATGTGCTAATGGCCCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCATGGAAGGAGGATTACTTCTTGTGATGTTTAATCTGGCTCATATTGCTGAAGAGTATTTCACAAAGCAATCAATGACTGATGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCTCTTGTTCTGGACGTGAATGATGATAACCTTCCTGATACTTCAGATCTGGAGCATAGAAAGGTGCCAGTGCGTGATGTTGAAGTGGGCTCATATATCTTGGTGGGAGCTGGTGAGTCTGTTCCTGTAGATTGCGAGGTTTATCAAGGTTGTGCTACGATCACTGTTGAGCACTTGACAGGAGAAGTCAAACCGTTGCAAATAAAGGTTGGGGAAAGAGTTCCAGGTGGAGCAAGAAACTTGGATGGTAGGATCATAGTGAAGGCTACAAAAACTTGGAAAGATTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAGCTACAGCGGTGGCTCGATGAATTTGGTGAGAATTACAGCAAGGTTGTTGTAGTTTTATCTGTAGCTGTTGCCCTCATTGGACCATTGTTGTTCAAGTGGCCATTTATTTCTACACCAGGTTTCAGAGGATCAGTTTATAGAGCACTTGGGCTCATGGTAGCCGCATCACCATGTGCACTGGCTGCAGCTCCATTGGCATACGCTATTGCAATAAGTTCCTGTGCAAGAAAGGGGATACTCCTGAAAGGTGGACACGTGCTTGATGCTATGGCTTCTTGTCATACTGTTGCATTTGATAAAACCGGGACATTGACTACAGGAGGACTTGTATTTAAAGCAATAGAACCTATTTATGGGCATAAGATTGGAGGAGATAAATCACATTTAGCTTCCTGTTGCATACCCAGCTGCGAAAAAGAAGCCCTTGCAGTCGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTAGTAGATCATAGTGTGGGGAAAGATCTTCCTTCTATCTCTGTTGAAAGTTTTGAATATTTCCCTGGAAGAGGTCTCATTGCAACTCTGCATGGCATTAAGTCAGGAGTTGGAAGTAAATTGCGGAAAGCATCCCTTGGTTCTGTGGATTTCATCATTTCCTTTTGCAAATCCGATAATGAATCAAGGAAGATCAAGGAAGCTGTTGGAGCATCATCATATGGAAGTGAATTTGTTCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTGATTCACCTTGAGGATCAGCCTCGACCTGGAGTCTTAGATGCAATAGCAGAACTACAAGATCAGGCGAAACTCCGTGTTATGATGTTAACAGGCGATCATGATTCAAGTGCATGGAAAGTTGCGAATGCTGTGGGCATAAATGAAGTTTACTGCAGTCTTAAGCCTGAGGACAAACTTGCTCATGTGAAGGAAATTTCAAGGGAGATGGGGGGTGGTCTGATCATGGTAGGCGAAGGTATAAATGATGCCCCTGCACTTGCTGCAGCTACTGTGGGAATAGTTCTTGCCCATCGTGCAAGCGCTACTGCTACAGCTGTTGCGGACGTCCTGCTACTTCAGGACAGTATTTCCGGTGTACCGTTCTGCATTGCCAAATCTCGTCAGACGACTTCACTGGTCAAGCAAAATGTGACGCTTGCCTTGTCATCTATCCTTCTAGCCTCTCTCCCATCCGTTTTGGGGTTTCTTCCCTTGTGGCTAACGGTCCTTCTACACGAGGGTGGCACTCTCCTGGTTTGCCTGAACTCCATACGTGCTCTAAATCACCCCTCATGGTCATGGAAACAAGATTTTCAAAATCTGATAAACGACGCCGGATCTAAACTGCACACGACACCCGAAACTAGCCCTGGTACCATCCAAACTGCGACTTTATAG 2466 46.39 MDALFVPITFSEPPHSLLTRSTYAGAQSRIGPVSLFSPRSSVIRLKRFPIRCKKFSYPRFGRFRCAVEASDHRHDHHHHHHHHGCQHHCGGDGDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHLCCGSAALFVTAAACPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPMEGGLLLVMFNLAHIAEEYFTKQSMTDVKELKESHPDFALVLDVNDDNLPDTSDLEHRKVPVRDVEVGSYILVGAGESVPVDCEVYQGCATITVEHLTGEVKPLQIKVGERVPGGARNLDGRIIVKATKTWKDSTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFISTPGFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDKSHLASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPSISVESFEYFPGRGLIATLHGIKSGVGSKLRKASLGSVDFIISFCKSDNESRKIKEAVGASSYGSEFVHAALSVDQKVTLIHLEDQPRPGVLDAIAELQDQAKLRVMMLTGDHDSSAWKVANAVGINEVYCSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLVKQNVTLALSSILLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNHPSWSWKQDFQNLINDAGSKLHTTPETSPGTIQTATL 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11162079 11172615 + Hsped.08g11200.1 Hepe08g1120 577092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1120 821 SUPERFAMILY HAD-like 448 779 IPR036412 -
Hepe08g1120 821 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Hepe08g1120 821 SFLD p-type atpase 432 732 IPR044492 -
Hepe08g1120 821 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Hepe08g1120 821 PRINTS P-type cation-transporting ATPase superfamily signature 625 635 - -
Hepe08g1120 821 PRINTS P-type cation-transporting ATPase superfamily signature 679 698 - -
Hepe08g1120 821 PRINTS P-type cation-transporting ATPase superfamily signature 703 715 - -
Hepe08g1120 821 PRINTS P-type cation-transporting ATPase superfamily signature 602 613 - -
Hepe08g1120 821 Pfam E1-E2 ATPase 257 430 - -
Hepe08g1120 821 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 70 808 IPR051949 -
Hepe08g1120 821 Pfam haloacid dehalogenase-like hydrolase 448 692 - -
Hepe08g1120 821 SUPERFAMILY Calcium ATPase, transduction domain A 258 343 IPR008250 -
Hepe08g1120 821 Gene3D - 222 348 - -
Hepe08g1120 821 SUPERFAMILY Calcium ATPase, transmembrane domain M 186 763 IPR023298 -
Hepe08g1120 821 Gene3D - 443 730 IPR023214 -
Hepe08g1120 821 NCBIfam HAD-IC family P-type ATPase 585 759 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g1120 821 NCBIfam HAD-IC family P-type ATPase 258 471 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g1120 821 SFLD C1.7: P-type atpase like 432 732 - -
Hepe08g1120 821 NCBIfam heavy metal translocating P-type ATPase 184 781 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Hepe08g1120 821 Gene3D - 461 610 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1120 Hepe-Chr8:11162079 Hepe09g0464 Hepe-Chr9:4231993 6.41e-58 dispersed
Hepe08g1120 Hepe-Chr8:11162079 Hepe08g1159 Hepe-Chr8:11782550 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1120 K01534 - csv:101221102 1413.67