Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1120 | ATGGACGCTCTCTTTGTCCCCATCACCTTCTCCGAACCTCCTCACTCTTTACTCACCCGTTCCACCTACGCCGGAGCTCAATCGAGGATTGGACCTGTTTCCCTCTTCTCCCCGCGTTCTTCTGTAATTCGGCTCAAGCGCTTTCCTATTCGCTGCAAGAAGTTTTCCTATCCTCGCTTCGGTCGCTTCCGTTGCGCCGTCGAGGCCTCCGATCATCGGCACGATCACCACCACCACCACCACCACCATGGCTGCCAGCACCATTGCGGTGGTGATGGTGATGGAGTGGAGCTGACTGGAGCTCAGAAGGCGTTTGTTCGATTTGCCGAAGCGATTAGGTGGACGGACTTGGCGAATTATTTGAGGGAGCATCTACACTTGTGTTGTGGTTCTGCTGCTTTGTTTGTGACTGCGGCTGCGTGTCCTTATTTGGTGCCTAAACCTGCTGTGAAGCCTTTACAGAATGTTTTCATTGCTGTTGCTTTTCCTTTAGTCGGGGTATCTGCTTCTCTTGATGCTCTTACTGATATTAGTGGTGGGAAAGTAAACATCCATGTGCTAATGGCCCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCATGGAAGGAGGATTACTTCTTGTGATGTTTAATCTGGCTCATATTGCTGAAGAGTATTTCACAAAGCAATCAATGACTGATGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCTCTTGTTCTGGACGTGAATGATGATAACCTTCCTGATACTTCAGATCTGGAGCATAGAAAGGTGCCAGTGCGTGATGTTGAAGTGGGCTCATATATCTTGGTGGGAGCTGGTGAGTCTGTTCCTGTAGATTGCGAGGTTTATCAAGGTTGTGCTACGATCACTGTTGAGCACTTGACAGGAGAAGTCAAACCGTTGCAAATAAAGGTTGGGGAAAGAGTTCCAGGTGGAGCAAGAAACTTGGATGGTAGGATCATAGTGAAGGCTACAAAAACTTGGAAAGATTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAGCTACAGCGGTGGCTCGATGAATTTGGTGAGAATTACAGCAAGGTTGTTGTAGTTTTATCTGTAGCTGTTGCCCTCATTGGACCATTGTTGTTCAAGTGGCCATTTATTTCTACACCAGGTTTCAGAGGATCAGTTTATAGAGCACTTGGGCTCATGGTAGCCGCATCACCATGTGCACTGGCTGCAGCTCCATTGGCATACGCTATTGCAATAAGTTCCTGTGCAAGAAAGGGGATACTCCTGAAAGGTGGACACGTGCTTGATGCTATGGCTTCTTGTCATACTGTTGCATTTGATAAAACCGGGACATTGACTACAGGAGGACTTGTATTTAAAGCAATAGAACCTATTTATGGGCATAAGATTGGAGGAGATAAATCACATTTAGCTTCCTGTTGCATACCCAGCTGCGAAAAAGAAGCCCTTGCAGTCGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTAGTAGATCATAGTGTGGGGAAAGATCTTCCTTCTATCTCTGTTGAAAGTTTTGAATATTTCCCTGGAAGAGGTCTCATTGCAACTCTGCATGGCATTAAGTCAGGAGTTGGAAGTAAATTGCGGAAAGCATCCCTTGGTTCTGTGGATTTCATCATTTCCTTTTGCAAATCCGATAATGAATCAAGGAAGATCAAGGAAGCTGTTGGAGCATCATCATATGGAAGTGAATTTGTTCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTGATTCACCTTGAGGATCAGCCTCGACCTGGAGTCTTAGATGCAATAGCAGAACTACAAGATCAGGCGAAACTCCGTGTTATGATGTTAACAGGCGATCATGATTCAAGTGCATGGAAAGTTGCGAATGCTGTGGGCATAAATGAAGTTTACTGCAGTCTTAAGCCTGAGGACAAACTTGCTCATGTGAAGGAAATTTCAAGGGAGATGGGGGGTGGTCTGATCATGGTAGGCGAAGGTATAAATGATGCCCCTGCACTTGCTGCAGCTACTGTGGGAATAGTTCTTGCCCATCGTGCAAGCGCTACTGCTACAGCTGTTGCGGACGTCCTGCTACTTCAGGACAGTATTTCCGGTGTACCGTTCTGCATTGCCAAATCTCGTCAGACGACTTCACTGGTCAAGCAAAATGTGACGCTTGCCTTGTCATCTATCCTTCTAGCCTCTCTCCCATCCGTTTTGGGGTTTCTTCCCTTGTGGCTAACGGTCCTTCTACACGAGGGTGGCACTCTCCTGGTTTGCCTGAACTCCATACGTGCTCTAAATCACCCCTCATGGTCATGGAAACAAGATTTTCAAAATCTGATAAACGACGCCGGATCTAAACTGCACACGACACCCGAAACTAGCCCTGGTACCATCCAAACTGCGACTTTATAG | 2466 | 46.39 | MDALFVPITFSEPPHSLLTRSTYAGAQSRIGPVSLFSPRSSVIRLKRFPIRCKKFSYPRFGRFRCAVEASDHRHDHHHHHHHHGCQHHCGGDGDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHLCCGSAALFVTAAACPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPMEGGLLLVMFNLAHIAEEYFTKQSMTDVKELKESHPDFALVLDVNDDNLPDTSDLEHRKVPVRDVEVGSYILVGAGESVPVDCEVYQGCATITVEHLTGEVKPLQIKVGERVPGGARNLDGRIIVKATKTWKDSTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFISTPGFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDKSHLASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPSISVESFEYFPGRGLIATLHGIKSGVGSKLRKASLGSVDFIISFCKSDNESRKIKEAVGASSYGSEFVHAALSVDQKVTLIHLEDQPRPGVLDAIAELQDQAKLRVMMLTGDHDSSAWKVANAVGINEVYCSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLVKQNVTLALSSILLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNHPSWSWKQDFQNLINDAGSKLHTTPETSPGTIQTATL | 821 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11162079 | 11172615 | + | Hsped.08g11200.1 | Hepe08g1120 | 577092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1120 | 821 | SUPERFAMILY | HAD-like | 448 | 779 | IPR036412 | - | |
Hepe08g1120 | 821 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 452 | 458 | IPR018303 | - | |
Hepe08g1120 | 821 | SFLD | p-type atpase | 432 | 732 | IPR044492 | - | |
Hepe08g1120 | 821 | PRINTS | P-type cation-transporting ATPase superfamily signature | 450 | 464 | - | - | |
Hepe08g1120 | 821 | PRINTS | P-type cation-transporting ATPase superfamily signature | 625 | 635 | - | - | |
Hepe08g1120 | 821 | PRINTS | P-type cation-transporting ATPase superfamily signature | 679 | 698 | - | - | |
Hepe08g1120 | 821 | PRINTS | P-type cation-transporting ATPase superfamily signature | 703 | 715 | - | - | |
Hepe08g1120 | 821 | PRINTS | P-type cation-transporting ATPase superfamily signature | 602 | 613 | - | - | |
Hepe08g1120 | 821 | Pfam | E1-E2 ATPase | 257 | 430 | - | - | |
Hepe08g1120 | 821 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 70 | 808 | IPR051949 | - | |
Hepe08g1120 | 821 | Pfam | haloacid dehalogenase-like hydrolase | 448 | 692 | - | - | |
Hepe08g1120 | 821 | SUPERFAMILY | Calcium ATPase, transduction domain A | 258 | 343 | IPR008250 | - | |
Hepe08g1120 | 821 | Gene3D | - | 222 | 348 | - | - | |
Hepe08g1120 | 821 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 186 | 763 | IPR023298 | - | |
Hepe08g1120 | 821 | Gene3D | - | 443 | 730 | IPR023214 | - | |
Hepe08g1120 | 821 | NCBIfam | HAD-IC family P-type ATPase | 585 | 759 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Hepe08g1120 | 821 | NCBIfam | HAD-IC family P-type ATPase | 258 | 471 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Hepe08g1120 | 821 | SFLD | C1.7: P-type atpase like | 432 | 732 | - | - | |
Hepe08g1120 | 821 | NCBIfam | heavy metal translocating P-type ATPase | 184 | 781 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Hepe08g1120 | 821 | Gene3D | - | 461 | 610 | IPR023299 | GO:0000166(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g1120 | Hepe-Chr8:11162079 | Hepe09g0464 | Hepe-Chr9:4231993 | 6.41e-58 | dispersed | |
Hepe08g1120 | Hepe-Chr8:11162079 | Hepe08g1159 | Hepe-Chr8:11782550 | 0.0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1120 | K01534 | - | csv:101221102 | 1413.67 |