Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1156 ATGAACTGCAATTGGAACTGCAAAATTCTTGCTTTTTTTCTTCTTCTTCTTCTTCAATCTTGTTGCAATGGACTGAATTTTGATGGGGTTCTCTTGCTTTCGTTTAAGTATGCCGTTTTGGACGACCCTCTTTTTGTCCTCCAAAATTGGAATTACTCTGATGACACGCCTTGTTCATGGCGGGGAGTTACCTGCTCTGCCGGCGGTGGCGGCGGTGGCGGCGGCGGGTCTAGAGTTACAGGTTTATCTCTACCGAATTCTCAGCTTATGGGCTCTGTTTCTTCTGATCTGGGTTTGATTGAAAACCTTCAATCGGTTGATCTTTCTAACAATTCCTTTAATGGGTCTCTCCCTTTGTCTCTGTTCAATGCCACTGTGCTTCGATTTCTTGATTTGTCGGAGAATTTGATCTCCGGTGAGGTTCCGGCGGCAGCTGGTCGACTTGGGAATCTCCAGGTTCTTAACCTCTCCGGCAATGCTCTGTTCGGGAAGTTTCCGAGTGATCTTGCGAATTTGGGAAATCTTACGGTTGTGTCTCTGAAGAGCAATTATATTTCTGGTGAAATTTCCGGTCGGTTTAAGTCGGTGGAGGTTTTGGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCTGTCTGATTTCGGTGGCGACAATTTGCATTATTTCAATATCTCATACAACAGACTTTCCGGCGAAATCCCGCCGGATTTCGCCCGCAAAATTCCGGCCAACGCCACAATTGATCTCTCCTTCAACAACCTCACCGGCGAAGTCCCTGTTTCCGATGTGTTCATGAACCAAGAAGCTGATTCCTTCACCGGAAACCGCCAACTCTGCGGCGAGTTAACGAAAATCCCATGCCCAATTCCTTCGTCGCCGGCGTCTCTCCCACCGGCGATCGCCGCTATTCCCTTAGACCCAAGTACCCCGGAAACCACCTCGCCGGAAAAAGAGAGCGAAACAGGGTTCAGACCGTCGACAATCGTCGCCATTGTACTCGGCGACACAGTCGGATTAGCAATTCTTTGCCTCCTGTTCTTCTACGTTTACCATTTGAAGAAAAAGAACAAAACCGTGGAAACCCATTTGAAAAACGAGCCCAATTTGGCCAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCGCGGTGGTCCTGCCTGAGAAAAACAGAGGATCCGGAAGAGAGAAATTCCGATCAGGCGAGTATTGGGTCGTTCTCCGGCCGCCGTGAGACAGCGGAGGACGGCGGAGAGGGGAACAAGAGAGGGACATTGGTGACGGTGGACGGCGGAGAGAAGGAGCTGGAATTGGAGACGCTGTTGAAGGCGTCAGCGTATATACTCGGCGCCACCGGATCGAGCATAACGTACAAGGCGGTGCTGGAAGACGGCACGGCGTTTGCGGTGAGGAGAATCGGAGACGGCGGAGTAGAGAAGATGAAAGATTTTGAGAATCAGATTCGTGTTGTGAGTAAATTGGTTCATCCAAATTTGGTTCGTGTTCGTGGATTTTATTGGGGCGTTGATGAGAAGCTCATTATTTATGATTTTGTTCCTAATGGTAGCCTTGCCAATGCTCGTTACAGGAAAGTGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATAGCCAAAGGAGTGGCTCGTGGGCTTTCTTATCTCCACGACAAGAAGCATGTCCATTCCAACTTGAGGCCCAGCAACATTCTTTTGGGCTACGATATGGAGCCCAAGATAGGCGATTTCGGCCTCGACAAGCTCTTGTTGGGCGACTCGAGCTACAAACCGGGCGGCTCCACTCGAAATTTCGGGAGCAAGAGGTCCACTGCGTCGCGGGACAGCTTCCAAGATTTCGTCACTGGACCAAGCCCTGGACCGAGCCCGAGCTCGATCGGTGGGGTGTCGCCGTACCTGGCACCGGAGTCGCTTCGGAGTCTGAAGCCCAACTCGAAATGGGACGTGTACTCTTTTGGGGTGATATTGCTTGAGCTACTAACGGGAAAGATCGTAGTGTTGGATGAATTAGGTCAAGGACTTGGGCTTGCAGTCGAAGACAAGAGTCGAGTCCTACGAATGGCTGATATGGCGATTCGAGCTGACGTGGAGGGAAGAGAAGAAGCGTTGTTGTCTTTCTTTAAATTAGGATATAGTTGTGCATCTCCTAGTCCACAAAAGAGACCATCCATGAAAGAAGCTTTGCAAGTTTTGGAGAAATTTCCAACCATATCCACGTCATCACACTATTATGGTCTCTAG 2274 49.56 MNCNWNCKILAFFLLLLLQSCCNGLNFDGVLLLSFKYAVLDDPLFVLQNWNYSDDTPCSWRGVTCSAGGGGGGGGGSRVTGLSLPNSQLMGSVSSDLGLIENLQSVDLSNNSFNGSLPLSLFNATVLRFLDLSENLISGEVPAAAGRLGNLQVLNLSGNALFGKFPSDLANLGNLTVVSLKSNYISGEISGRFKSVEVLDLSSNLINGSLLSDFGGDNLHYFNISYNRLSGEIPPDFARKIPANATIDLSFNNLTGEVPVSDVFMNQEADSFTGNRQLCGELTKIPCPIPSSPASLPPAIAAIPLDPSTPETTSPEKESETGFRPSTIVAIVLGDTVGLAILCLLFFYVYHLKKKNKTVETHLKNEPNLAKDSWSTSSSESRGFSRWSCLRKTEDPEERNSDQASIGSFSGRRETAEDGGEGNKRGTLVTVDGGEKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKMKDFENQIRVVSKLVHPNLVRVRGFYWGVDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHSNLRPSNILLGYDMEPKIGDFGLDKLLLGDSSYKPGGSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSSIGGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIVVLDELGQGLGLAVEDKSRVLRMADMAIRADVEGREEALLSFFKLGYSCASPSPQKRPSMKEALQVLEKFPTISTSSHYYGL 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11715598 11719283 - Hsped.08g11560.1 Hepe08g1156 577128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1156 757 CDD STKc_IRAK 451 745 - -
Hepe08g1156 757 Gene3D Ribonuclease Inhibitor 26 192 IPR032675 -
Hepe08g1156 757 Gene3D Ribonuclease Inhibitor 193 289 IPR032675 -
Hepe08g1156 757 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Hepe08g1156 757 ProSiteProfiles Protein kinase domain profile. 445 748 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1156 757 Pfam Leucine Rich Repeat 218 238 IPR001611 GO:0005515(InterPro)
Hepe08g1156 757 Pfam Leucine Rich Repeat 102 123 IPR001611 GO:0005515(InterPro)
Hepe08g1156 757 Pfam Leucine Rich Repeat 150 172 IPR001611 GO:0005515(InterPro)
Hepe08g1156 757 FunFam Leucine-rich repeat receptor-like protein kinase 25 191 - -
Hepe08g1156 757 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Hepe08g1156 757 MobiDBLite consensus disorder prediction 369 386 - -
Hepe08g1156 757 SUPERFAMILY L domain-like 32 280 - -
Hepe08g1156 757 MobiDBLite consensus disorder prediction 369 428 - -
Hepe08g1156 757 Pfam Protein kinase domain 451 740 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1156 757 Gene3D Phosphorylase Kinase; domain 1 423 520 - -
Hepe08g1156 757 MobiDBLite consensus disorder prediction 605 639 - -
Hepe08g1156 757 PANTHER OS05G0588300 PROTEIN 193 746 IPR050994 -
Hepe08g1156 757 MobiDBLite consensus disorder prediction 387 401 - -
Hepe08g1156 757 SUPERFAMILY Protein kinase-like (PK-like) 450 743 IPR011009 -
Hepe08g1156 757 MobiDBLite consensus disorder prediction 605 636 - -
Hepe08g1156 757 Gene3D Transferase(Phosphotransferase) domain 1 521 753 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0446 Hepe-Chr7:4599220 Hepe08g1156 Hepe-Chr8:11715598 3.57e-178 dispersed
Hepe08g1156 Hepe-Chr8:11715598 Hepe10g1528 Hepe-Chr10:52008438 3.20e-65 dispersed
Hepe08g1156 Hepe-Chr8:11715598 Hepe01g1165 Hepe-Chr1:76776293 1.67e-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73057 PF00069 Pkinase 1.70E-30 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1156 - - - 0.0