Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1159 ATGGGAACCCTCTCCTTCCCAATTGCATCCTCCAAATCCCGACTGTTACCGACGCGGAATCGAATTGCATTCCCAAACCCTTTTCTTCAACCATCATTCCCTTCTTCTCCATTTCCTGTTCGTAATTTTCCCAATCTTCACCTACGGCGGCTCGTTCTCTGCGCCGCCGCGACAACTACTCATTCGAATCACGACCACCACCATCACCATGGTCACCACCATTGTGATCATGATGTGGAGCTGACTGGGCCTCAGAAAGCGGTGATTGGATTCGCTAAAGCCATTAGATGGACGGATTTGGCGAGCTATCTGAGGGAACACTTGCAATTATGTTGCTGTTCTATGGCTTTGTTTGTTGCTGCTGCTGTTTGCCCTTATTTGGTGCCGAACCCCATTGTGAAGCCTTTGCAAAATGCTTTCATTGCCATTGCTTTTCCTTTAGTCGGGGTCTCCTCTTCTCTTGATGCTTTAACTGATATTAGTGGTGGAAAAGTAAACATCCATGTACTTATGGCTCTTGCAGCCTTTGCATCCATCTTTATGGGGAACGCCTTGGAAGGAGGACTGCTACTTGGCATGTTTAATTTGTCTCACATTGCGGAAGAGTATTTTACAAGTCGTGCAATGATTGATGTCAAAGAGTTGAAGGAAAACTATCCAGACTCTGCCCTTGTTTTAGATACAAATGATGGTAAACTTCCAAATATTACAGATTTGTCCTACCATAAGGTGCCTGTCCAGGACGTACAAGTGGACTCCTATATATTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTAGTGCTACAGTCACTATTGAGCATCTAACAGGCGAAATCAAACCTTTAGAGATTACGGTTGGAGACCGAGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAATCATTAAGGCAACAAAGACCTGGAAAGAGTCAACTCTGAGTCGGATAGTGAAATTGACTGAAGAGGCACAACTGAACAAACCAAGACTTCAAAGGTGGCTGGATGAATTTGGCGAGCATTATAGCAAAGCAGTTGTAGTTTTGTCCATTGCTATTGCCCTCGTTGGTCCAATATTATTCAAGTGGCCATTTATCGGTACATCAGCTTGTAGGGGATCGGTTTACAGAGCTCTAGGCCTCATGGTGGCAGCATCACCTTGTGCTTTGGCCGTTGCACCATTGGCTTATGCTATTGCAATTAGTTCCTGTGCAAGAAAGGGGATATTGTTGAAAGGTGGGCGTGTATTAGATGCTTTAGCTTCTTGTCACACTATAGCATTTGATAAAACTGGGACGTTGACTACTGGGGGCCTTATTTTCAAAGCAATTGAACCAATTTACGGACATAAGGTCCGAGAAAACAAATCAGACTTTGGTTCCTGTTGCATTCCCTGCTGTGAAGAAGAAGCTCTTGCTGTAGCAGCTGCAATGGAGAAGGGTACTACTCACCCGATTGGGAGAGCTGTGGTTGACCATACTATGGGAAAAGACTTCCCTTCCTTTTCTGTTCAAGATTTGGAATATTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGGTACTGAGTCAGGACCTGAAGGTGGGAAACTATTGAAAGCATCTCTTGGTTCCCTTGATTTCATCACTTCACTCTGCAAATCAGAAACCAAAACAAAAGAGATCAAAGAAGCTGCGAGTACATCTTCATATGGAAGTGAATTTGTTCATGCCGCTCTTGCAGTTGATGGGAAGGTAACACTTATTCATCTCGAGGATCGACCGCATCCTGGAGTTTCAAGTGTAATAGTAGAATTAACAGATATTGCAAAACTCCATGTTATGATGTTGACTGGAGATCACGAGTCAAGTGCACAGAGAGTGGCAAAAGCAGTGGGCATCAAGGAAGTCCACTTCAGTCTAAAGCCTGAAGATAAGCTTAGTCACGTGAAAAGTATCTCTAGGGAAAATGGAGGAGGACTAATCATGGTTGGTGAAGGCATTAATGATGCACCAGCTCTTGCCGCTGCTACCGTAGGAATAGTGCTTGCTCAACGTGCTAGTGCAACGGCCATAGCTGTGGCAGATGTTCTGTTGCTGCAGGATAATATTTCTGGTGTACCATTCTGTATCGCCAAGTCTCGCCAGACTACTGCCCTAGTTAAACAGAATGCTAGTCTTGCCTTAATTTCAATATTTCTGGCTTCCCTTCCCGCAGTTTTAGGGTTTCTTCCCTTGTGGTTAACGGTACTTCTGCATGAAGGTGGTACTCTTCTCGTTTGCCTCAATTCGATACGTGCTCTGAATAATCCCAGTTGGTCCTGGAGGCAGGATTTGGAGCGATTTCTAATGGAGCTGAAATTTAGGGGCTCACAGCCAAGCCTTAATACTAGCTCTACCACGATCGAAAGTTTAAGTATATTGTCAAAGTAA 2430 44.61 MGTLSFPIASSKSRLLPTRNRIAFPNPFLQPSFPSSPFPVRNFPNLHLRRLVLCAAATTTHSNHDHHHHHGHHHCDHDVELTGPQKAVIGFAKAIRWTDLASYLREHLQLCCCSMALFVAAAVCPYLVPNPIVKPLQNAFIAIAFPLVGVSSSLDALTDISGGKVNIHVLMALAAFASIFMGNALEGGLLLGMFNLSHIAEEYFTSRAMIDVKELKENYPDSALVLDTNDGKLPNITDLSYHKVPVQDVQVDSYILVGAGESVPVDCEVFQGSATVTIEHLTGEIKPLEITVGDRVPGGARNLDGRIIIKATKTWKESTLSRIVKLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLSIAIALVGPILFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGRVLDALASCHTIAFDKTGTLTTGGLIFKAIEPIYGHKVRENKSDFGSCCIPCCEEEALAVAAAMEKGTTHPIGRAVVDHTMGKDFPSFSVQDLEYFPGRGLVATLHGTESGPEGGKLLKASLGSLDFITSLCKSETKTKEIKEAASTSSYGSEFVHAALAVDGKVTLIHLEDRPHPGVSSVIVELTDIAKLHVMMLTGDHESSAQRVAKAVGIKEVHFSLKPEDKLSHVKSISRENGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLQDNISGVPFCIAKSRQTTALVKQNASLALISIFLASLPAVLGFLPLWLTVLLHEGGTLLVCLNSIRALNNPSWSWRQDLERFLMELKFRGSQPSLNTSSTTIESLSILSK 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11782550 11804196 - Hsped.08g11590.1 Hepe08g1159 577131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1159 809 ProSitePatterns E1-E2 ATPases phosphorylation site. 435 441 IPR018303 -
Hepe08g1159 809 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 742 IPR023298 -
Hepe08g1159 809 CDD P-type_ATPase_HM 111 765 - -
Hepe08g1159 809 Gene3D - 444 594 IPR023299 GO:0000166(InterPro)
Hepe08g1159 809 Pfam haloacid dehalogenase-like hydrolase 431 676 - -
Hepe08g1159 809 SFLD p-type atpase 415 716 IPR044492 -
Hepe08g1159 809 SUPERFAMILY HAD-like 431 763 IPR036412 -
Hepe08g1159 809 SUPERFAMILY Calcium ATPase, transduction domain A 238 326 IPR008250 -
Hepe08g1159 809 NCBIfam heavy metal translocating P-type ATPase 167 765 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Hepe08g1159 809 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 61 795 IPR051949 -
Hepe08g1159 809 SFLD Haloacid Dehalogenase 415 716 - -
Hepe08g1159 809 Gene3D - 426 714 IPR023214 -
Hepe08g1159 809 Pfam E1-E2 ATPase 235 413 - -
Hepe08g1159 809 PRINTS P-type cation-transporting ATPase superfamily signature 609 619 - -
Hepe08g1159 809 PRINTS P-type cation-transporting ATPase superfamily signature 687 699 - -
Hepe08g1159 809 PRINTS P-type cation-transporting ATPase superfamily signature 663 682 - -
Hepe08g1159 809 PRINTS P-type cation-transporting ATPase superfamily signature 433 447 - -
Hepe08g1159 809 NCBIfam HAD-IC family P-type ATPase 240 455 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g1159 809 NCBIfam HAD-IC family P-type ATPase 564 743 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g1159 809 Gene3D - 205 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1159 Hepe-Chr8:11782550 Hepe09g0464 Hepe-Chr9:4231993 2.42e-56 dispersed
Hepe10g1192 Hepe-Chr10:46606824 Hepe08g1159 Hepe-Chr8:11782550 1.65e-07 dispersed
Hepe08g1120 Hepe-Chr8:11162079 Hepe08g1159 Hepe-Chr8:11782550 0.0 transposed
Hepe02g1312 Hepe-Chr2:16648267 Hepe08g1159 Hepe-Chr8:11782550 5.26e-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1159 K01534 - mdm:103453726 1135.94