Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1163 ATGGATTTTATCTATGCCTTCCTTCTTCTTCTTCTTGCTTTCCTTTTTCTGCAACAATTCAGAACCCGCGGGAGCAATCTGCCGCCAAGTCCACCGTCTATTCCGATCATCGGCCATCTCCACCTCTTAAAACGCCCAATCCACCGGAACTTCCACATCATCGCCGCCAAATACGGCCCCATTTTCACTCTCCGATTCGGATCTCGCCTTGCTCTTGTAGTCTCTTCACTCAAAATAGCCGAAGAATGCTTCACCAAAAACGACGTCGTCTTCGCCAACCGCCCCCGCCTGCTCATCAGCAAATACCTCGGCTACAACTGCACCACTATCGCCACCGCCCCTTACGGCGACCACTGGCGGAATCTCCGCCGCCTCTCCACCGTCGAGATCTTCTCCACGGCGCGCCTCAACGCGTCTCTCAGAATCCGGAAGGACGAAATCCGGCGACTGTTGGTCAAACTCCATTCCGAATCGTTCGCTAAGGTGGAGTTGAAGTCGATGTTTTCGGAACTGAGTTTCAACGCCGTGATGAGGGTGGTGGCCGGAAAACGGTACTACGGGGAGGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAGCTTATGGAGGAGATTTCGGCTCATGGAGGAACTTCGCATTGGGTCGATTTCATGCCGATTTTGAAATGGATTGGGTGCGATGGATATGAGAAGAGTTTGGCGAAATTGACGAAGAGGGCCGATCGATTTATGCAGGAATTGATTGAAGAACGGCGCCGGAATAAGAAAGTTTTAGAAAAAGAAAAACAGAATTCTCTGCTTGATCGGCTTCTGGAATTGCAGCCGTCTGAACCGGATTATTACACCGATCAGATCATCAAGGGGATCGTTCTGGTTTTGTTGCGCGCGGGAACAGATACGTCATCTGTGACCTTAGATTGGGCAATGACTCAATTACTCAACAATCCGGAGGTGTTAGCGAAGGCCAAAGCCGAGATAGACACCAAGATCGGTGAAGATCGACCTGTTGAAGAAGCGGATCTCGTCAATCTCAACTACCTTCAAGCCATTATTTCCGAGACCTTCCGCTTGCACCCTGCAGCACCGATGCTCCTCACACACTATTCTTCCGACGACTGCACCGTCGCAGGCTACAACATTCCACGTGGGACAACGTTGTTGGTCAATGCATGGGCAATTCACAGAGACCCGAAGCTATGGGACGACCCGACGAGCTTCCGACCGGAGAGGTTTTTGGGGGAAGGAAATGAATTGCAATCGAACAAACTAATCACTTTTGGGATTGGAAGGAGGGCTTGTCCGGGAGAAACTATGGCTCAACGTTTTATAGGATTAACTTTGGGACTATTGATTCAGTGTTATGAGTGGCAAAAGGCTGGAGAAGAAAAGGTGGACATGACTGAAGGTGGGGGCATTACCATTCAAAAAGTTATGCCTTTGGAAACCATGTGTAAAGCTCGCCCAATTATGGATAAAGTTCTATCAAACGGTTTGGGCCAAATTTGA 1509 49.9 MDFIYAFLLLLLAFLFLQQFRTRGSNLPPSPPSIPIIGHLHLLKRPIHRNFHIIAAKYGPIFTLRFGSRLALVVSSLKIAEECFTKNDVVFANRPRLLISKYLGYNCTTIATAPYGDHWRNLRRLSTVEIFSTARLNASLRIRKDEIRRLLVKLHSESFAKVELKSMFSELSFNAVMRVVAGKRYYGEEVSDEAEAREFRELMEEISAHGGTSHWVDFMPILKWIGCDGYEKSLAKLTKRADRFMQELIEERRRNKKVLEKEKQNSLLDRLLELQPSEPDYYTDQIIKGIVLVLLRAGTDTSSVTLDWAMTQLLNNPEVLAKAKAEIDTKIGEDRPVEEADLVNLNYLQAIISETFRLHPAAPMLLTHYSSDDCTVAGYNIPRGTTLLVNAWAIHRDPKLWDDPTSFRPERFLGEGNELQSNKLITFGIGRRACPGETMAQRFIGLTLGLLIQCYEWQKAGEEKVDMTEGGGITIQKVMPLETMCKARPIMDKVLSNGLGQI 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11877340 11879947 - Hsped.08g11630.1 Hepe08g1163 577135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1163 502 CDD CYP81 59 481 - -
Hepe08g1163 502 Coils Coil 227 265 - -
Hepe08g1163 502 SUPERFAMILY Cytochrome P450 28 488 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PANTHER CYTOCHROME P450 82C3-RELATED 7 488 IPR050651 -
Hepe08g1163 502 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 FunFam Cytochrome P450 family protein 19 491 - -
Hepe08g1163 502 Pfam Cytochrome P450 28 474 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1163 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe08g1163 502 Gene3D Cytochrome P450 15 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1196 Hepe-Chr3:66051177 Hepe08g1163 Hepe-Chr8:11877340 1.27e-180 dispersed
Hepe04g0098 Hepe-Chr4:29448452 Hepe08g1163 Hepe-Chr8:11877340 9.04e-106 dispersed
Hepe08g1163 Hepe-Chr8:11877340 Hepe08g1167 Hepe-Chr8:11924291 3.55e-179 dispersed
Hepe08g1162 Hepe-Chr8:11845219 Hepe08g1163 Hepe-Chr8:11877340 8.53e-111 tandem
Hepe08g1163 Hepe-Chr8:11877340 Hepe08g1164 Hepe-Chr8:11887878 8.50e-177 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1163 K13260 - csv:101210967 764.607