Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g1165 | ATGAGAAATAGTTCAACAACCATGGATGATATTTTGCTCTACATTTTTCTCTTCCTAAGCTTTCTCATTTTTGCCTTCAAATTTCTGCGGCGCCATGGTAGAAACCTCCCACCAAGTCCATTTTTTTCCCTTCCATTAATAGGTCATCTCCATCTCCTCAAACATCCAATTCACCAAAACCTCCACGAGCTCTCCAAGAACTACGGCCATGTCTTCTCTCTCTGGTTCGGCTCCCGTCTAGTTGTAGTAGTATCATCTCCTTCAGCAGTTCGTGAATGCTTCACAAAAAACGACATCGTTCTCGCCAACCGGCCATTTTTGAACACTGGAAAGCACCTGACTTATAACTTTACGGTACTAGCCGTCGCCCCTTATGGCGATCTGTGGCGTAACCTTCGCCGCATTAGTACTTGTGAGATTTTCTCGGCCAGTCGACTGAACTTGTTCTCGGGAATTCGACAAGACGAAGTCGAGCGGTTGTTGTGTAAATTATGCGGCGGTTCTTCGGTGGAAGAATTGTCGGTTGTCGAGCTCGAGCCGATGTTTTTGAATTTTACGTCGAATATTATCATGAGGATGGTTGCAGGAAAGAGGTATTTTGGAGATGAGGTGTCGGATGAAGGAAAAGCAAGAGAATTTAGAGATGTTGTGAAGCGAGTTATGTTGTATGCTGGGGCAACAAATCCAGGAGATTTTATACCCATATGGAATTTGATTGATCCAACTGGTTTGGAGAAGAAGATAATGAAAGTTGGAGAGGAAGCTGATCAAATCTTTCAGGGTTTAATTGATGAGATTCGGAAGCAAAATGAAGGTGGGAATACGATGATTCATCATTTACTTCACTTGCAGAGCACCCAGCCTCAATACTTTAGTGACCAAATTATCAAAGGCCTCATACATGTTATATTATTAGCGGGGATTGATACAATAGCTGTGACATTAGAATGGGCAATCTCGCACTTGCTCAACAATCCAGAGGTGATAAAGAAAGCGAGATTCGAGATAGAGTGTTTTACTAAACAAGAACGTCTAGTGAATGAAGATGATTTGTCAAGTTTGAGTTATTTGCAAGGAATAATCTTGGAGACTTTGCGGTTGACCCCGGCCGCTCCTTTGCTTGTGCCGCACTGCGCATCCAAAGATTGCAAAATAGAAGGCTATGACGTACCACGCGACACAATCGTGTTCGTTAACGCTTGGGCAATACATAGAGATCCAAATCTATGGGAAGATGTCACTAGTTTTAAGCCAGAAAGGCATGAAAATGCAATGGAATGTGATTCTTCATACAAACTATTACCATTCGGGTTGGGGAGGAGGGCATGCCCCGGTGTGGGAATTGCGCAACGCGTGGTTGGCTTGACTTTGGCATCATTGATTCAATGCTTTGATTGGGAAAGAATGAATAGATCATTAGTTGACATGACTGAAGGCCAAGGGATTACTATGCCGAAAGCTGAACCATTGGTAGCCAAGTTCCCTGGTAGTTTGGAGTCCAATCTTCAGGCGGATGCTATTGCTGGGTATTCTTTTGTTGTGGCTTCTGGTTTGCGCTACGGCTATGGGCTTTTGATCCAGTTGCTTTCGGCCAGGCTTGGGGTTGCCACTGGCAGGCACTAG | 1623 | 44.18 | MRNSSTTMDDILLYIFLFLSFLIFAFKFLRRHGRNLPPSPFFSLPLIGHLHLLKHPIHQNLHELSKNYGHVFSLWFGSRLVVVVSSPSAVRECFTKNDIVLANRPFLNTGKHLTYNFTVLAVAPYGDLWRNLRRISTCEIFSASRLNLFSGIRQDEVERLLCKLCGGSSVEELSVVELEPMFLNFTSNIIMRMVAGKRYFGDEVSDEGKAREFRDVVKRVMLYAGATNPGDFIPIWNLIDPTGLEKKIMKVGEEADQIFQGLIDEIRKQNEGGNTMIHHLLHLQSTQPQYFSDQIIKGLIHVILLAGIDTIAVTLEWAISHLLNNPEVIKKARFEIECFTKQERLVNEDDLSSLSYLQGIILETLRLTPAAPLLVPHCASKDCKIEGYDVPRDTIVFVNAWAIHRDPNLWEDVTSFKPERHENAMECDSSYKLLPFGLGRRACPGVGIAQRVVGLTLASLIQCFDWERMNRSLVDMTEGQGITMPKAEPLVAKFPGSLESNLQADAIAGYSFVVASGLRYGYGLLIQLLSARLGVATGRH | 540 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 11899683 | 11903122 | + | Hsped.08g11650.1 | Hepe08g1165 | 577137 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g1165 | 540 | CDD | CYP81 | 69 | 490 | - | - | |
| Hepe08g1165 | 540 | SUPERFAMILY | Cytochrome P450 | 37 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | P450 superfamily signature | 443 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | P450 superfamily signature | 434 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | FunFam | Cytochrome P450 family protein | 28 | 496 | - | - | |
| Hepe08g1165 | 540 | PANTHER | CYTOCHROME P450 82C3-RELATED | 20 | 494 | IPR050651 | - | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 433 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 89 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 443 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | Gene3D | Cytochrome P450 | 24 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | Pfam | Cytochrome P450 | 38 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1165 | 540 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 436 | 445 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe08g1165 | Hepe-Chr8:11899683 | Hepe08g1316 | Hepe-Chr8:14983391 | 1.13e-147 | dispersed | |
| Hepe08g1165 | Hepe-Chr8:11899683 | Hepe08g1167 | Hepe-Chr8:11924291 | 1.69e-250 | proximal | |
| Hepe08g1164 | Hepe-Chr8:11887878 | Hepe08g1165 | Hepe-Chr8:11899683 | 5.59e-243 | tandem | |
| Hepe08g1165 | Hepe-Chr8:11899683 | Hepe08g1166 | Hepe-Chr8:11915835 | 2.15e-09 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g1165 | K13260 | - | csv:105434396 | 800.431 |