Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g1167 | ATGGATATTCTTTTGCTTTCTATTTCTCTCTTTCTAATTTCTCTCTTCTTTGCCTTCAACTTTCTGCTGCGACCTCATCGCCCAAATCTCCCACCAACCCCATTTTTTTCCCTTCCATTACTAGGCCATCTCCATCTCCTCAAAAATCCAGTCCACCAAACATTCCACAAGCTCTCACAAAAATACGGCCAAGTCTTCTCTCTCCGATTAGGTTCTCGTCTCGTCGTAGTCGTATCATCTCCTTCCGCCGTGCAAGAATGCTTTACGAAGAACGACATCGTTCTCGCAAATCGGCCATTATTGAACACCGGAAAGCACTTAGCATACAATCACACCACCATGGCGATCTCCCCTTACGGCGAACATTGGCGAAACCTCCGCCGGATCGGCTCCCTCGAGATTTTCTCGACGAGCCGCCTCAATCTGTTCTTGGGAATTCGAGAAGATGAAGTCAAGCGTCTACTGCGTAAATTATGTGGCGATTCTTTTGAAGAGTTTAAGGTAGTGGAATTGGAACACATGTTGTTAGATCTCATGTTCAAAATTATTATGAGAATGGTGGCGGGAAGGAAGTTTTGTGAAGATGAGAATAATGTGTTGGATGAGGGACATTCCAAGAAGTTTAGAGAAATGGTGACACAATTTATGGCACATGGTGGGGCAACGAATCCAGGTGATTTCATACCCTTGTGGAATTGGATTGATCCAACTGGTTTTAAGAAGAGGATAATGAAACTTGGACAAAGTGGAGATGTATTACTTCAAGGATTAATTGATGAGATTCGAAATGAAAAAGATGGAGGGAGCACTATGATTGATCATTTGCTTTCTTTGCAGAAAACTGAGCCTCAATATTATAGTGACCAAATCATCAAAGGACTCATTCAAGTTATATTATTAGCTGGGATTGACACAACAGCTGTGACATTAGAATGGGCACTATCACAATTGCTCAACAATCCAGAAGTGTTACACAAAGCAAAAGCTGAGATAGACTGCTTGATTGGGCAAGAACGTTTAGTTAATGAAGCAGATCTACCAAGTTTGAGTTACCTACAAGGAATAATCTCCGAGACTCTGCGGCTGAACCCGGCAGCGCCTCTCCTCGTGCCGCATTGTGCATTCGAAGACTGCAAAATAGAAGGATACGACGTTCCGCGTGACACAATTGTATTGATTAATACTTGGGCTATACATAGAGATCCAAATCTATGGGAAGATGCTACCAGTTTTAAACCTGAAAGACATATGGCAAATGCAATTGGAAGTGAGTCATACAAACTAATACCATTTGGGTTGGGGAGGAGAGCTTGTCCTGGTGTGGGAATGGCGCAACGAGTGGTTGGCTTGACTTTAGCGTCATTGATACAAGGCTTTGAATGGGAAAGAGTGAGCAACTCATTAGTTGATATGAGTGAAGGTATAGGCCTCACAATGCCCAAAGCTCAACGTTTGGTAGCTAAGTGTAAACCACGCCCAATCACGAAAGCTATTCTCAATGGAGCAATTGACAATATTTGA | 1521 | 42.8 | MDILLLSISLFLISLFFAFNFLLRPHRPNLPPTPFFSLPLLGHLHLLKNPVHQTFHKLSQKYGQVFSLRLGSRLVVVVSSPSAVQECFTKNDIVLANRPLLNTGKHLAYNHTTMAISPYGEHWRNLRRIGSLEIFSTSRLNLFLGIREDEVKRLLRKLCGDSFEEFKVVELEHMLLDLMFKIIMRMVAGRKFCEDENNVLDEGHSKKFREMVTQFMAHGGATNPGDFIPLWNWIDPTGFKKRIMKLGQSGDVLLQGLIDEIRNEKDGGSTMIDHLLSLQKTEPQYYSDQIIKGLIQVILLAGIDTTAVTLEWALSQLLNNPEVLHKAKAEIDCLIGQERLVNEADLPSLSYLQGIISETLRLNPAAPLLVPHCAFEDCKIEGYDVPRDTIVLINTWAIHRDPNLWEDATSFKPERHMANAIGSESYKLIPFGLGRRACPGVGMAQRVVGLTLASLIQGFEWERVSNSLVDMSEGIGLTMPKAQRLVAKCKPRPITKAILNGAIDNI | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 11924291 | 11927022 | - | Hsped.08g11670.1 | Hepe08g1167 | 577139 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g1167 | 506 | CDD | CYP81 | 63 | 485 | - | - | |
| Hepe08g1167 | 506 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | Pfam | Cytochrome P450 | 32 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe08g1167 | 506 | FunFam | Cytochrome P450 family protein | 22 | 495 | - | - | |
| Hepe08g1167 | 506 | SUPERFAMILY | Cytochrome P450 | 31 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | Gene3D | Cytochrome P450 | 22 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1167 | 506 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 492 | IPR050651 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g0095 | Hepe-Chr4:29304125 | Hepe08g1167 | Hepe-Chr8:11924291 | 1.94e-106 | dispersed | |
| Hepe04g1278 | Hepe-Chr4:68346706 | Hepe08g1167 | Hepe-Chr8:11924291 | 5.42e-203 | dispersed | |
| Hepe08g1162 | Hepe-Chr8:11845219 | Hepe08g1167 | Hepe-Chr8:11924291 | 2.97e-163 | dispersed | |
| Hepe08g1163 | Hepe-Chr8:11877340 | Hepe08g1167 | Hepe-Chr8:11924291 | 3.55e-179 | dispersed | |
| Hepe08g1164 | Hepe-Chr8:11887878 | Hepe08g1167 | Hepe-Chr8:11924291 | 1.14e-276 | dispersed | |
| Hepe08g1167 | Hepe-Chr8:11924291 | Hepe08g1316 | Hepe-Chr8:14983391 | 9.43e-159 | dispersed | |
| Hepe08g1165 | Hepe-Chr8:11899683 | Hepe08g1167 | Hepe-Chr8:11924291 | 1.69e-250 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g1167 | K13260 | - | csv:101204413 | 701.434 |