Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1182 ATGGAGTGGGTTCGAGGAGACCAACTAGGTCGTGGAAATTTTGCGACAATCAATTTAGCAAAAATTACAGAAGGGTTCGATCAATTTCCGCCATTAATGGCGGTGAAATCCTCTGTTTCTGTATCCTCTGTTTCGCTCAAGAACGAGAAGCAAATTCTGGATCGAATTGGGAGTTGTCCACAAATCGTTACTTGTTTTGGCGATGGATTTAGTGTAGAAAGAGATGGGGAGAAGTATTATAATCTGTTCTTGGAGTACGCCAATGGCGGAAGTCTTGCGGATACTGTGAAAACCCACTGCGGCGGATTGCCGGAATTTGATGTTCGGCGGTACACGAGGGCGATTCTTTGTGGGCTCCGGCATATCCACGGTAATGGGTTTGTTCATTGCGATTTGAAGCTTTCGAATGTGTTGGTTTTTGGGAATGGCGATGTTAAGATCGCTGATTTTGGGCTTGCGAAAATGGCGGCGGCGGAAACAGAGGAGAAATTTGAGTGGAGAGGGACTCCGATGTATATGTCGCCGGAGACGGTGAACGGCGGCGAGTATGAGCCGCCGTGTGATATTTGGGCGTTGGGTTGCGCCGTCGTGGAGATGGTAGCCGGAAAGCCAGCGTGGAGGGTTCGGCCAGAAACGGATATATTTGGGCTGATGATGAGGATCGGAGTCGGAGACGAAGTGCCAGAGCTTCCGGAGAATTTATCGGCGGAGGGGAAAGATTTTCTCCGGTGGTGTTTCGTTAAGGATTCGAGGAAGAGATGGACGGCGGAGATGCTTTTGAATCACCCATTCGTGGCCGGTGTTAGTGACACTGTTACATCGAAGGAATCGGAAGTGACGACGGATTCGCCGACGGGCCCTTTCGACTTCCCGGAATTTGTTTGCTCCGAGCAAGGTTCTGATGAGTTGAATTTCGGTTGTTCTGATTCGACGCCGGAGATGATGAGTAGGGTACGGCGGCTGGTGACGGAGAAGCCTTTGGATTGGTCTGTTATGGATAGTTGGGTGACAGTGAGGTGA 1020 50.2 MEWVRGDQLGRGNFATINLAKITEGFDQFPPLMAVKSSVSVSSVSLKNEKQILDRIGSCPQIVTCFGDGFSVERDGEKYYNLFLEYANGGSLADTVKTHCGGLPEFDVRRYTRAILCGLRHIHGNGFVHCDLKLSNVLVFGNGDVKIADFGLAKMAAAETEEKFEWRGTPMYMSPETVNGGEYEPPCDIWALGCAVVEMVAGKPAWRVRPETDIFGLMMRIGVGDEVPELPENLSAEGKDFLRWCFVKDSRKRWTAEMLLNHPFVAGVSDTVTSKESEVTTDSPTGPFDFPEFVCSEQGSDELNFGCSDSTPEMMSRVRRLVTEKPLDWSVMDSWVTVR 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12123821 12124920 - Hsped.08g11820.1 Hepe08g1182 577154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1182 339 SMART serkin_6 3 265 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1182 339 SUPERFAMILY Protein kinase-like (PK-like) 3 286 IPR011009 -
Hepe08g1182 339 Gene3D Transferase(Phosphotransferase) domain 1 94 286 - -
Hepe08g1182 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g1182 339 Pfam Protein kinase domain 5 265 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1182 339 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Hepe08g1182 339 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1182 339 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524(InterPro)
Hepe08g1182 339 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 266 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe08g1182 339 CDD STKc_MAPKKK 2 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1250 Hepe-Chr4:68007687 Hepe08g1182 Hepe-Chr8:12123821 1.30e-137 dispersed
Hepe08g1007 Hepe-Chr8:9592925 Hepe08g1182 Hepe-Chr8:12123821 1.05e-49 dispersed
Hepe08g1182 Hepe-Chr8:12123821 Hepe09g0661 Hepe-Chr9:6245643 8.70e-51 dispersed
Hepe08g1182 Hepe-Chr8:12123821 Hepe02g0231 Hepe-Chr2:2349997 2.16e-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73059 PF00069 Pkinase 1.10E-51 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1182 - - - 0.0