Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g1211 | ATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACAAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTACATTCGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGTATCCATTGATGGCACTCGTATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTCCTTGTACCACACACCACTACTGATCAAGAACTTCAGCACTTGAGAAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGGCTGTCTGCTCTTGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCCGGTAACGTTCTTGTGGGAAGCTACTGTAACTTCACAAATAGGGGTGGCTTGGTTCATCCACATACGTCTATTGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAACCGTGGAAGCGATGTGATTGCTGCTGGATTGACAGTAAATGACTGGACTGCATTTTGTGGTTCAGACACCACTGCGACAGAATTATCGGTCATTGAGAGCGTTTTCAAATTGAGAGAGGCTCAACCAAGTTCCATTGTTGACGAGATGAGGAAGTCGCTAATAGACACTTATGTGTGA | 738 | 44.44 | MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKVSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSDVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDTYV | 245 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 12616301 | 12618501 | + | Hsped.08g12110.1 | Hepe08g1211 | 577183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g1211 | 245 | CDD | IF6 | 2 | 223 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
| Hepe08g1211 | 245 | FunFam | Eukaryotic translation initiation factor 6 | 1 | 225 | - | - | |
| Hepe08g1211 | 245 | Pfam | eIF-6 family | 4 | 203 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
| Hepe08g1211 | 245 | PIRSF | Transl_init_IF-6 | 1 | 226 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
| Hepe08g1211 | 245 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 244 | IPR002769 | GO:0000054(PANTHER)|GO:0000460(PANTHER)|GO:0000470(PANTHER)|GO:0005730(PANTHER)|GO:0005829(PANTHER)|GO:0030687(PANTHER)|GO:0042256(InterPro)|GO:0043022(InterPro)|GO:0043023(PANTHER)|GO:1902626(PANTHER) | |
| Hepe08g1211 | 245 | NCBIfam | translation initiation factor IF-6 | 4 | 224 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
| Hepe08g1211 | 245 | SMART | eIF6neu2 | 3 | 204 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
| Hepe08g1211 | 245 | Hamap | Translation initiation factor 6 [eif6]. | 1 | 245 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
| Hepe08g1211 | 245 | SUPERFAMILY | Pentein | 1 | 224 | - | - | |
| Hepe08g1211 | 245 | Gene3D | - | 1 | 225 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g1211 | K03264 | - | cit:102614879 | 456.832 |