Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1211 ATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACAAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTACATTCGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGTATCCATTGATGGCACTCGTATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTCCTTGTACCACACACCACTACTGATCAAGAACTTCAGCACTTGAGAAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGGCTGTCTGCTCTTGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCCGGTAACGTTCTTGTGGGAAGCTACTGTAACTTCACAAATAGGGGTGGCTTGGTTCATCCACATACGTCTATTGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAACCGTGGAAGCGATGTGATTGCTGCTGGATTGACAGTAAATGACTGGACTGCATTTTGTGGTTCAGACACCACTGCGACAGAATTATCGGTCATTGAGAGCGTTTTCAAATTGAGAGAGGCTCAACCAAGTTCCATTGTTGACGAGATGAGGAAGTCGCTAATAGACACTTATGTGTGA 738 44.44 MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKVSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSDVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDTYV 245
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 12616301 12618501 + Hsped.08g12110.1 Hepe08g1211 577183
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1211 245 CDD IF6 2 223 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Hepe08g1211 245 FunFam Eukaryotic translation initiation factor 6 1 225 - -
Hepe08g1211 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Hepe08g1211 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Hepe08g1211 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 244 IPR002769 GO:0000054(PANTHER)|GO:0000460(PANTHER)|GO:0000470(PANTHER)|GO:0005730(PANTHER)|GO:0005829(PANTHER)|GO:0030687(PANTHER)|GO:0042256(InterPro)|GO:0043022(InterPro)|GO:0043023(PANTHER)|GO:1902626(PANTHER)
Hepe08g1211 245 NCBIfam translation initiation factor IF-6 4 224 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Hepe08g1211 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Hepe08g1211 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Hepe08g1211 245 SUPERFAMILY Pentein 1 224 - -
Hepe08g1211 245 Gene3D - 1 225 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1211 K03264 - cit:102614879 456.832