Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1222 ATGTCTGAGAATCCGGCGTCGCCTCCCTTGAAGCTTTACTCCTACTGGAGGAGCTCTTGTTCTCACCGTGTTCGAATTGCCCTAAACTTGAAAGGGCTAAATTTCGAGTACAAACCTGTTAATCTACTGAAGGGAGAGCAACACTCTCCTGAATATGAGAAGCTCAATCCTATCGGTTATGTACCTACTCTCGTGGATGGGGATATTGTTATTGCTGACTCTTTTGCTATATTAATGTATTTGGAGGAGAAGTATCCTCAGCATCCTCTGTTGCCTCGTGATCTTACTAAAAGAGCTATTAATTATCAGGCTGCAAATATCGTTTCTTCAAGCATACAGCCTTTTCAAAATATAGCTGTTCTGAAGTACATCGAGGAAAAATCTGGTCCAGAGGAGAAACTTCCTTGGGTTCAACATCACATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCCACTGGAGACGAAATTTTTCTGGCGGACTTGTTTTTGGCTCCTCAAATGCATGGTGCCACTAAAAGATTCAATGTTGACATGTCCAAATTTCCACTTTTGTCCAGGTTGAATGAGGAATACAATGCTATACCAGCATTTCAAGATGCAGCGCCGGCCAAGCAGCCTGATGCTCAAAGCTCTACCTAA 666 42.19 MSENPASPPLKLYSYWRSSCSHRVRIALNLKGLNFEYKPVNLLKGEQHSPEYEKLNPIGYVPTLVDGDIVIADSFAILMYLEEKYPQHPLLPRDLTKRAINYQAANIVSSSIQPFQNIAVLKYIEEKSGPEEKLPWVQHHIEKGFTALEKLLKAHAGKFATGDEIFLADLFLAPQMHGATKRFNVDMSKFPLLSRLNEEYNAIPAFQDAAPAKQPDAQSST 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12819996 12824273 + Hsped.08g12220.1 Hepe08g1222 577194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1222 221 NCBIfam maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Hepe08g1222 221 FunFam Glutathione S-transferase Z1 9 92 - -
Hepe08g1222 221 FunFam Maleylacetoacetate isomerase 93 220 - -
Hepe08g1222 221 SFLD Glutathione Transferase (cytosolic) 10 195 IPR040079 -
Hepe08g1222 221 Gene3D - 93 220 - -
Hepe08g1222 221 Gene3D Glutaredoxin 9 92 - -
Hepe08g1222 221 SUPERFAMILY Thioredoxin-like 8 93 IPR036249 -
Hepe08g1222 221 Pfam Glutathione S-transferase, C-terminal domain 118 205 IPR004046 -
Hepe08g1222 221 CDD GST_N_Zeta 10 82 IPR034333 -
Hepe08g1222 221 CDD GST_C_Zeta 97 214 IPR034330 -
Hepe08g1222 221 SUPERFAMILY GST C-terminal domain-like 89 216 IPR036282 -
Hepe08g1222 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Hepe08g1222 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Hepe08g1222 221 Pfam Glutathione S-transferase, N-terminal domain 9 82 IPR004045 -
Hepe08g1222 221 SFLD Main (cytGST) 10 195 - -
Hepe08g1222 221 PANTHER MALEYLACETOACETATE ISOMERASE 9 217 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1872 Hepe-Chr5:69014338 Hepe08g1222 Hepe-Chr8:12819996 3.33e-78 dispersed
Hepe08g1220 Hepe-Chr8:12783308 Hepe08g1222 Hepe-Chr8:12819996 3.69e-113 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1222 K01800 - csv:101213302 359.377