Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1241 ATGGATGTGGAGGCTTCGAAGAATGGCACAGACGATACAATCGTCTGTTATGCGCCAACGATGATCACTACAAATGGGGTGTGGCAAGGTGACAACCCTTTGGATTATTCTCTCCCTCTCTTCATCTTGCAGTTAACAATGGTGGTTGTGATGACTCGCTCTTTGGTTTTCCTCTTAAAACCCTTTCGCCAACCTCGAGTCATCTCGGAAATTTTGGGTGGAGTGATTTTGGGGCCTTCGGTATTGGGGAGGAATGCTAAATTTGCCAACACTGTATTTCCTTTAAGAAGTGTAATGGTGCTTGAAACAATGGCCAACGTGGGGCTTCTCTACTTTCTGTTCTTGGTTGGTGTGGAAATGGATCTCTCAGTGATTCGTCGAACTGGGAAGAAGGCAATGACAATAGCTATAGCAGGAATGATTCTTCCATTCGGAATCGGAGCTGCTTTTTCATTCCAGTTTCACAAAGCAGATGATAAACTGAGCTACAACACTTACATTATGTTTCTTGGTATCGCGCTTTCGGTGACTGCTTTCCCAGTGCTAGCTAGGATTCTTGCAGAGCTTAAACTGATAAACTCAGAGCTTGGAAGGATGGCTATGGCTTCTGCTCTTTTCAATGACATGTGTGCTTGGGTTCTCTTAGCTTTAGCCATAGCCTTATCTGAGAATGATTCCTCATCTTTGGCTTCTTTATGGGTTGTACTGTCAAGTGCAGGCTTTGTTTTGTTTTGCATCTTTGTCATTAGACCGATGATCGCGTGGATGATTCGAAAAACCCCGGAAGGAGAAAGTTTCAGTGAGTTCTACATATGTTTGATCCTCACAGGGGTTATGATCTCAGGGTTTATTACAGATGCCATTGGAACACACTCGGTTTTTGGGGCTTTTGTGTTTGGGTTGGTTATCCCAAATGGGTCACTTGGGGTGGCTTTAATTGAGAAACTTGAGGATTTTGTTTCAGGGCTTTTGCTCCCTCTCTTCTTTGCAATAAGTGGGCTTAAGACTAATGTGGATAGCATAGATGGATTGACCACTTGGATAGCTATTATATTCATCACAATCCTTTCTTTTATTGGCAAAATCATTGGAACTCTCCTTGCCGCCATTTGTTATCAGATGTCCTATCGCGAAGGCGTCACATTAGGCTTGCTTATGAACACCAAAGGCCTTATTGAAATGATCATCCTCAACGTTGGAAAGGACCAAAAGGTGTTAGATGATCAAACATTCACAGTTATGGTGATTGTAGCCCTGGTTATGACGGGGATAATAACACCTGTAGTTACCATAATCTATAAGCCAACTAGAAGGTTTCTACCCTATAAGAAAAGAACAGTTCAAGCATCGAAACCAGATTCAGAGTTCAGAATATTAGTTTGCATCCACACACCTCGAAATGTGCCAACAATCATCAACCTCCTTGATGCATCCCACCCAACCAAAAGATCCCCAATCTGCGTTTATGTGCTACACTTGGTCGAACTCACAGGCCGAGCCTCCGCCATGCTCATTGTCCACAACACTCGAAAATCAGGTCGCCCAGCACTGAATCGAACCCAAGCTCAATCAGATCACATCATCAATGCATTCGAGAACTACGAACAACATGTCGAATGCGTCTCTGTGCAGCCCCTCACAGCCATTTCCCCCTACTCGACAATGCACGAAGACATCTGCAATTTAGCCGAGGACAAACGCGTCGCCTTCATAATCATCCCATTCCACAAGCAACAAACAGTGGATGGAGGAATGGAAGCTGCAAATCCAGCATTTAGATTGGTTAACCAAAACGTGTTAGCCAATGCCCCTTGCTCCGTCGGAATCCTAGTGGATCGAGGCCTAAGCGGCTCGAATCGAGCCACGTCGAACAAAGCATCTCATTATAACATAATCGTGCTGTTCTTCGGCGGACAAGACGACAGAGAAGCTCTATCATACGCATGGAGAATGTCAGATCATCCAGGAGTAAGCTTAACAATAATGCGATTCATAGCCGGAGGAGAAGCAGCAGAACCAAAACCAGAAGCAAACGCAAACGAAGAAGGAATTTCAGCAATGGAAATAGAAATTGACAGAGAGAGGAAACTGGACGAAGAATACATACAAGAATTCAGGTCAAAGAATGTAAATGCAGAGTCGATTACTTACACGGAGAAAGTATTGAACAACGGTGAGGAGACAGTGGCGGCGATAAGATCAATGGACGATGCTCACGACTTGTTCATCGTGGGAAGAGGAGAAGCTCAGCTATCACCACTCACCGCCGGAATGACAGACTGGAGTGAATGTCCAGAGCTGGGAGCAATCGGAGATTTGTTAGCTTCGTCGGATTTTGCAGCGACGGCGTCAGTTTTAGTAGTGCAACAGTTCGGAGCAGCGGCGGATCATGAGGATGAAGAAGAAGAAGAAGAAGAAGATTCACCACATAATCAAGATCCAGGGGAGCAATTCCAAGGATTGAGATCAGTGAATTTGAGGCAACATCCTCCGTCAAGAGTTGATATTATGTACAATACTGTCAATACATGA 2532 44.55 MDVEASKNGTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVVMTRSLVFLLKPFRQPRVISEILGGVILGPSVLGRNAKFANTVFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVIRRTGKKAMTIAIAGMILPFGIGAAFSFQFHKADDKLSYNTYIMFLGIALSVTAFPVLARILAELKLINSELGRMAMASALFNDMCAWVLLALAIALSENDSSSLASLWVVLSSAGFVLFCIFVIRPMIAWMIRKTPEGESFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGSLGVALIEKLEDFVSGLLLPLFFAISGLKTNVDSIDGLTTWIAIIFITILSFIGKIIGTLLAAICYQMSYREGVTLGLLMNTKGLIEMIILNVGKDQKVLDDQTFTVMVIVALVMTGIITPVVTIIYKPTRRFLPYKKRTVQASKPDSEFRILVCIHTPRNVPTIINLLDASHPTKRSPICVYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHVECVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEAANPAFRLVNQNVLANAPCSVGILVDRGLSGSNRATSNKASHYNIIVLFFGGQDDREALSYAWRMSDHPGVSLTIMRFIAGGEAAEPKPEANANEEGISAMEIEIDRERKLDEEYIQEFRSKNVNAESITYTEKVLNNGEETVAAIRSMDDAHDLFIVGRGEAQLSPLTAGMTDWSECPELGAIGDLLASSDFAATASVLVVQQFGAAADHEDEEEEEEEDSPHNQDPGEQFQGLRSVNLRQHPPSRVDIMYNTVNT 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13197270 13200185 + Hsped.08g12410.1 Hepe08g1241 577213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1241 843 FunFam Cation/H(+) antiporter 15 40 440 - -
Hepe08g1241 843 Gene3D - 477 765 - -
Hepe08g1241 843 Gene3D - 40 438 IPR038770 -
Hepe08g1241 843 PANTHER CATION/H + ANTIPORTER 16 796 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Hepe08g1241 843 Pfam Sodium/hydrogen exchanger family 55 430 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe08g1241 843 MobiDBLite consensus disorder prediction 793 843 - -
Hepe08g1241 843 MobiDBLite consensus disorder prediction 796 810 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0670 Hepe-Chr1:68919654 Hepe08g1241 Hepe-Chr8:13197270 1.45e-160 dispersed
Hepe03g1756 Hepe-Chr3:74440533 Hepe08g1241 Hepe-Chr8:13197270 2.05e-110 dispersed
Hepe06g0185 Hepe-Chr6:6656738 Hepe08g1241 Hepe-Chr8:13197270 6.63e-155 dispersed
Hepe06g0355 Hepe-Chr6:13270896 Hepe08g1241 Hepe-Chr8:13197270 2.64e-227 dispersed
Hepe06g0356 Hepe-Chr6:13354918 Hepe08g1241 Hepe-Chr8:13197270 1.62e-231 dispersed
Hepe06g1732 Hepe-Chr6:68388335 Hepe08g1241 Hepe-Chr8:13197270 6.14e-111 dispersed
Hepe07g0093 Hepe-Chr7:868686 Hepe08g1241 Hepe-Chr8:13197270 6.97e-98 dispersed
Hepe07g0094 Hepe-Chr7:888532 Hepe08g1241 Hepe-Chr8:13197270 2.90e-123 dispersed
Hepe07g0782 Hepe-Chr7:9508398 Hepe08g1241 Hepe-Chr8:13197270 1.07e-250 dispersed
Hepe07g0783 Hepe-Chr7:9531134 Hepe08g1241 Hepe-Chr8:13197270 9.15e-181 dispersed
Hepe08g1241 Hepe-Chr8:13197270 Hepe10g1365 Hepe-Chr10:49907047 4.01e-144 dispersed
Hepe08g1241 Hepe-Chr8:13197270 Hepe04g0258 Hepe-Chr4:45783203 1.47e-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1241 K26731 - csv:101219265 1436.4