Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1280 ATGTTAGCGACGCCGGAGGCGGCTCGGTTCGTGCTAGTGACAAAGGCTCATCTCTTCAAACCCACATACCCACAAAGCAAAGAGCGTCTAATAGGACCATCGGCTCTGTTTTTCCACCAAAGCGAAACCCATTTGCGGCTCCGTAAGCTAATCCAAAGCTCACTCTCACCGGACCCTGTTCGAACCTTGGTCCCTCAAATCCACGCCCTCGCCATCTCTGCATTTCCCTCATGGCTCGATGGCCATCTCCTCAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTGGGAATTTTGGCAATTTTTGGGGAATTTGAGGACGCGAAATACAGAGAGGAACTAATGAAGAATTATGCCATAGTGAACAAAGGCTATAATTCTTTTCCAACCAACATTCCCGGAACGCTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATGATAAGGTGCATAATCTCAGAGAAAAGGGAGAAAATAAGAAAGAAATTGGTGGAGAAGAATGTGTTGGGAAGTCTATTAAAATGGAGATCAGATAATGAAAAAGGAGAAAGTTTAAGTGATGAGCAGATCGCCGACAACCTTATCGGAGTTCTCTTTGCTGCTCAAGACACCACCGCTACTGTTCTCACTTGGCTTCTTAAATATCTCCATGATAACCACAAAGTTCTACAAGCTGTCAAGGCAGAACAGAAGGCAATTGAAGAAGACATTAATGAGGGGAGGCGACCAATGAGGTGGGCTCACACACGAAACATGCCGTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCCAGCATTATATCATTCACTTTTAGGGAAGCTGTCACAGATGTTCAATACAATGCAGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTATTCAGGAATATTCATCACAATCCTGACTACTTTGTTGACCCTCACAAATTTGATCCTTCAAGATTTGAGAATGCTCCAAGACCCAATACATTCATGCCATTTGGCAGTGGGGTCCATTCCTGCCCTGGAAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTGGTCACCAAATTCAGGTGGGAATTGGCAGGAGAGAGAGATGGGATTGAGCATGGGCCATTTCCAGTGCCTATAGATGGGCTTCCAATCAAAGTCTGGAGATTATCCACATGA 1188 44.28 MLATPEAARFVLVTKAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRTLVPQIHALAISAFPSWLDGHLLNTFHQMKKFSFEVGILAIFGEFEDAKYREELMKNYAIVNKGYNSFPTNIPGTLYKKALKARKRLGEMIRCIISEKREKIRKKLVEKNVLGSLLKWRSDNEKGESLSDEQIADNLIGVLFAAQDTTATVLTWLLKYLHDNHKVLQAVKAEQKAIEEDINEGRRPMRWAHTRNMPFTNKVVLESLRMASIISFTFREAVTDVQYNAGYLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFENAPRPNTFMPFGSGVHSCPGNELAKLEILIMIHHLVTKFRWELAGERDGIEHGPFPVPIDGLPIKVWRLST 395
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 13982169 13987451 - Hsped.08g12800.1 Hepe08g1280 577252
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1280 395 Gene3D Cytochrome P450 1 393 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 Pfam Cytochrome P450 2 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PANTHER CYTOCHROME P450 26 2 369 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Hepe08g1280 395 CDD CYP90-like 1 390 - -
Hepe08g1280 395 PRINTS P450 superfamily signature 333 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PRINTS P450 superfamily signature 261 272 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PRINTS P450 superfamily signature 204 221 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 SUPERFAMILY Cytochrome P450 2 391 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 335 344 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe08g1280 395 PRINTS E-class P450 group I signature 260 278 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PRINTS E-class P450 group I signature 301 325 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PRINTS E-class P450 group I signature 342 365 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PRINTS E-class P450 group I signature 332 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe08g1280 395 PRINTS E-class P450 group I signature 193 210 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1280 Hepe-Chr8:13982169 Hepe10g1260 Hepe-Chr10:48077895 1.05e-147 dispersed
Hepe01g1760 Hepe-Chr1:82707553 Hepe08g1280 Hepe-Chr8:13982169 7.23e-200 wgd
Hepe02g0585 Hepe-Chr2:5930217 Hepe08g1280 Hepe-Chr8:13982169 7.20e-184 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1280 K09843 - vvi:100245540 568.54