Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g1280 | ATGTTAGCGACGCCGGAGGCGGCTCGGTTCGTGCTAGTGACAAAGGCTCATCTCTTCAAACCCACATACCCACAAAGCAAAGAGCGTCTAATAGGACCATCGGCTCTGTTTTTCCACCAAAGCGAAACCCATTTGCGGCTCCGTAAGCTAATCCAAAGCTCACTCTCACCGGACCCTGTTCGAACCTTGGTCCCTCAAATCCACGCCCTCGCCATCTCTGCATTTCCCTCATGGCTCGATGGCCATCTCCTCAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTGGGAATTTTGGCAATTTTTGGGGAATTTGAGGACGCGAAATACAGAGAGGAACTAATGAAGAATTATGCCATAGTGAACAAAGGCTATAATTCTTTTCCAACCAACATTCCCGGAACGCTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATGATAAGGTGCATAATCTCAGAGAAAAGGGAGAAAATAAGAAAGAAATTGGTGGAGAAGAATGTGTTGGGAAGTCTATTAAAATGGAGATCAGATAATGAAAAAGGAGAAAGTTTAAGTGATGAGCAGATCGCCGACAACCTTATCGGAGTTCTCTTTGCTGCTCAAGACACCACCGCTACTGTTCTCACTTGGCTTCTTAAATATCTCCATGATAACCACAAAGTTCTACAAGCTGTCAAGGCAGAACAGAAGGCAATTGAAGAAGACATTAATGAGGGGAGGCGACCAATGAGGTGGGCTCACACACGAAACATGCCGTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCCAGCATTATATCATTCACTTTTAGGGAAGCTGTCACAGATGTTCAATACAATGCAGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTATTCAGGAATATTCATCACAATCCTGACTACTTTGTTGACCCTCACAAATTTGATCCTTCAAGATTTGAGAATGCTCCAAGACCCAATACATTCATGCCATTTGGCAGTGGGGTCCATTCCTGCCCTGGAAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTGGTCACCAAATTCAGGTGGGAATTGGCAGGAGAGAGAGATGGGATTGAGCATGGGCCATTTCCAGTGCCTATAGATGGGCTTCCAATCAAAGTCTGGAGATTATCCACATGA | 1188 | 44.28 | MLATPEAARFVLVTKAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRTLVPQIHALAISAFPSWLDGHLLNTFHQMKKFSFEVGILAIFGEFEDAKYREELMKNYAIVNKGYNSFPTNIPGTLYKKALKARKRLGEMIRCIISEKREKIRKKLVEKNVLGSLLKWRSDNEKGESLSDEQIADNLIGVLFAAQDTTATVLTWLLKYLHDNHKVLQAVKAEQKAIEEDINEGRRPMRWAHTRNMPFTNKVVLESLRMASIISFTFREAVTDVQYNAGYLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFENAPRPNTFMPFGSGVHSCPGNELAKLEILIMIHHLVTKFRWELAGERDGIEHGPFPVPIDGLPIKVWRLST | 395 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 13982169 | 13987451 | - | Hsped.08g12800.1 | Hepe08g1280 | 577252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g1280 | 395 | Gene3D | Cytochrome P450 | 1 | 393 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | Pfam | Cytochrome P450 | 2 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PANTHER | CYTOCHROME P450 26 | 2 | 369 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Hepe08g1280 | 395 | CDD | CYP90-like | 1 | 390 | - | - | |
| Hepe08g1280 | 395 | PRINTS | P450 superfamily signature | 333 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | P450 superfamily signature | 342 | 353 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | P450 superfamily signature | 261 | 272 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | P450 superfamily signature | 204 | 221 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | SUPERFAMILY | Cytochrome P450 | 2 | 391 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 335 | 344 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | E-class P450 group I signature | 260 | 278 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | E-class P450 group I signature | 301 | 325 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | E-class P450 group I signature | 342 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | E-class P450 group I signature | 332 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe08g1280 | 395 | PRINTS | E-class P450 group I signature | 193 | 210 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe08g1280 | Hepe-Chr8:13982169 | Hepe10g1260 | Hepe-Chr10:48077895 | 1.05e-147 | dispersed | |
| Hepe01g1760 | Hepe-Chr1:82707553 | Hepe08g1280 | Hepe-Chr8:13982169 | 7.23e-200 | wgd | |
| Hepe02g0585 | Hepe-Chr2:5930217 | Hepe08g1280 | Hepe-Chr8:13982169 | 7.20e-184 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g1280 | K09843 | - | vvi:100245540 | 568.54 |