Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1281 ATGGAAAGTGCTGATGGAACTGTGAGGCTTGGTGCTCTGAACTTGAAGCCGGATCGGACCGCCTTTGATTTGAGCCCCGATGTTTCTGTTTCGTCTCCGGTTACCAGGCAGAAAGCCGCCGCTGCTAAAGAGTTCATTGAGAATCATTACAAGAATCATCTCCAAGGTCTGCAGGATCGCAGAGAGAGACGGAGAACGCTTCAACGAAGAGTGCAAGAAGCTCAGATGTCGGTTGAAGAACAGGAAGAGATGTTGAGGAACTTGGAACGCAGAGAGACGGAATTTATGAGACTGCAAAGACGTAAAGTTGGAATCGATGACTTTGAACAATTAACTGTTATCGGTAAAGGTGCATTCGGTGAGGTTAGATTATGTCGTGCAAAAGGAACTGGGGAAATTTATGCCATGAAGAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCATGTTCGATCTGAGAGGAATTTACTTGCAGAGGTTGATAGTCGGTGCATTGTAAAACTCTTCTATTCTTTTCAAGATTCTGAATTCTTGTACCTTATTATGGAGTATTTACCTGGTGGTGACATTATGACATTGCTAATGAGAGAAGACATTCTGTCAGAGGATGTTGCTCGCTTTTACATGGCAGAGAGCGTTTTAGCTATTCATTCGATTCATCAGCACAATTATATACATAGGGATATAAAACCAGATAATCTCATACTAGATAAAACTGGCCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTATTCGAGTATACTTTTGAATGACGAAGAGTTAACAGCCCAGCAGGCCAATAGTGAAGGTCAAGGTCATACTGACTCTAATGGAACTCATTGGATGATGCCAAAAGAACAAATTCAACAGTGGAAGCGTAATCGTCGTGCGTTGGCTTTTTCAACTGTTGGGACACTGGATTATATGGCACCTGAAGTATTGCTTAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCATTAGGGGCCATTATGTATGAGATGCTGGCTGGTTATCCTCCATTTTGGTCTGATGATCCAAGGATGACATTCCGCAAGATAATAAATTGGAGATCTTGCCTGAAGTTTCCCGAGGAGGCACAAATCTCAGAGGAAGCTAAGGATCTGATCAGCCACTTGTTATGTGATGTTGAAACAAGGTTGGGAACACGAGGAATAGAAGAAATAAAGGCGCATCCATGGTTCAAAGACATTCAGTGGGATAAGCTGTATGAAATGGAAGCTGCATACAAACCAACTGTCACTGGAGAACTAGACACTCAGAACTTTGAGAAGTTTCCTGAAGTTCAAGACCCTCCATCAGACATGCCAACTGTTGGACCTTGGAGGAAGATGCTAACTTCAAAAGATACCAATTTCATTGGATTTACTTTTAAGAAGTCAAACGTCAAATCACTTGAGAGTACAGGTACAGATATTCATTCGTATACGTCATCAAAAACACCATCTCTGGTTACATTGTTGGGTCGAATAGACTTGCAAGAAAGTATGATACCAGAAATTGAACAAAAGCAGGAAGCTGCATGA 1575 42.16 MESADGTVRLGALNLKPDRTAFDLSPDVSVSSPVTRQKAAAAKEFIENHYKNHLQGLQDRRERRRTLQRRVQEAQMSVEEQEEMLRNLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEIYAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDILSEDVARFYMAESVLAIHSIHQHNYIHRDIKPDNLILDKTGHLKLSDFGLCKPLDDKYSSILLNDEELTAQQANSEGQGHTDSNGTHWMMPKEQIQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFWSDDPRMTFRKIINWRSCLKFPEEAQISEEAKDLISHLLCDVETRLGTRGIEEIKAHPWFKDIQWDKLYEMEAAYKPTVTGELDTQNFEKFPEVQDPPSDMPTVGPWRKMLTSKDTNFIGFTFKKSNVKSLESTGTDIHSYTSSKTPSLVTLLGRIDLQESMIPEIEQKQEAA 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14007229 14012641 - Hsped.08g12810.1 Hepe08g1281 577253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1281 524 SMART serkin_6 108 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1281 524 FunFam Non-specific serine/threonine protein kinase 192 259 - -
Hepe08g1281 524 Pfam Protein kinase domain 108 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1281 524 Gene3D Transferase(Phosphotransferase) domain 1 310 429 - -
Hepe08g1281 524 Gene3D Transferase(Phosphotransferase) domain 1 192 260 - -
Hepe08g1281 524 ProSiteProfiles Protein kinase domain profile. 108 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1281 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g1281 524 Pfam Protein kinase C terminal domain 430 474 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1281 524 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1281 524 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524(InterPro)
Hepe08g1281 524 SUPERFAMILY Protein kinase-like (PK-like) 85 463 IPR011009 -
Hepe08g1281 524 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 478 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Hepe08g1281 524 Coils Coil 57 101 - -
Hepe08g1281 524 CDD STKc_NDR_like 106 475 - -
Hepe08g1281 524 FunFam Non-specific serine/threonine protein kinase 79 191 - -
Hepe08g1281 524 Gene3D Phosphorylase Kinase; domain 1 430 440 - -
Hepe08g1281 524 Gene3D Phosphorylase Kinase; domain 1 105 191 - -
Hepe08g1281 524 SMART pkinase_C_6 412 476 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1281 524 FunFam Non-specific serine/threonine protein kinase 310 429 - -
Hepe08g1281 524 CDD MobB_NDR_LATS-like 42 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2572 Hepe-Chr7:70177967 Hepe08g1281 Hepe-Chr8:14007229 2.37e-74 dispersed
Hepe08g1281 Hepe-Chr8:14007229 Hepe09g0892 Hepe-Chr9:8937139 4.98e-198 dispersed
Hepe08g1281 Hepe-Chr8:14007229 Hepe01g1901 Hepe-Chr1:83849529 9.85e-207 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73063 PF00069 Pkinase 7.10E-66 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1281 K08790 - csv:101222805 976.081