Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1288 | ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGAGGAGGTGGAGGAGCTCCGGCGAACTATCCATTAGCACGGCAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGCATGGGGAGTATAGGCAAAGATTTTGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACAATGGCAACTTCTGCTGCTGCTGCTGCTGCTGCTGCTGTCGCCGCTGCTACTGCTGCGGCTGCTGCTAGTAAAGAAGGGACTGGTAGTGGTGGGTATTTGCAGAGACAGGGCTCTTTGACTCTGCCTCGGACACTCAGCCAGAAGAAGGTGGATGATGTATGGAAGGACATACTCAATGAACATGGTGGTGTTAAAGATGGGAATATTGTTGCTTCTAATTTGCAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTTGTGAGAGAGGATACTCAGGTGACTGCAAATCCCAACAATGGAGGGTTCTTTGGCAATAACAACACTGCTTTTGGAATTGATTTTCAGCAGAGGCAGGCTAAAATCCCTGAGAATAACAATCACCTTCCGATTCAATCGTTGAATGCCAATGGAGTTAGAGCACATCAGCCGCAGCCAATATTTCCAAAGCAGCCTACTGTGACCTATGGATCTCAGTTGCCTTTACCCAGTGATGGTCAGCTTCAGCTAGCTAGTCCAGGAATTAGAGGTGGGATTATGGGTATTGCAGATCAAGGGTTGAGCACAAATTTGATGCAAGCCTCTGCACTGCAGGGTGGAAGGATGGGAGTGGTTAGTTTAGCAGCTGGGCCGATGCCTATTGCGACAGGATCTCCAGCGAACCAACTATCATCTGATGGGATCGGAAAGAGCAATGGCGATACCTCATCCGTGTCTCCGGTGCCTTACACGCTTAATAGTGGATTCAGGGGGAGGAGAAGTAATGGGACTGTCGACAAAGTCGTCGAGAGGAGGCAACGGAGAATGATAAAGAACAGAGAGTCAGCTGCTAGATCGCGGGCTCGAAAGCAGGCTTACACGATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAGCAGGCAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAAGTAACGGATAAGCAACAAGGAGGCAAGAAGCTATGCTTAAGACGAACGCAGACGGGTCCATGGTGA | 1266 | 48.58 | MNFKDFGNDPSAGNGGGGGGAPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMATSAAAAAAAAVAAATAAAAASKEGTGSGGYLQRQGSLTLPRTLSQKKVDDVWKDILNEHGGVKDGNIVASNLQQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNNTAFGIDFQQRQAKIPENNNHLPIQSLNANGVRAHQPQPIFPKQPTVTYGSQLPLPSDGQLQLASPGIRGGIMGIADQGLSTNLMQASALQGGRMGVVSLAAGPMPIATGSPANQLSSDGIGKSNGDTSSVSPVPYTLNSGFRGRRSNGTVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQKNRALEVTDKQQGGKKLCLRRTQTGPW | 421 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 14310396 | 14314000 | + | Hsped.08g12880.1 | Hepe08g1288 | 577260 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1288 | 421 | Coils | Coil | 359 | 396 | - | - | |
Hepe08g1288 | 421 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 341 | 392 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1288 | 421 | Gene3D | - | 341 | 398 | - | - | |
Hepe08g1288 | 421 | MobiDBLite | consensus disorder prediction | 401 | 421 | - | - | |
Hepe08g1288 | 421 | CDD | bZIP_plant_BZIP46 | 343 | 395 | - | - | |
Hepe08g1288 | 421 | MobiDBLite | consensus disorder prediction | 296 | 320 | - | - | |
Hepe08g1288 | 421 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 346 | 361 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1288 | 421 | Pfam | bZIP transcription factor | 343 | 395 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1288 | 421 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | 341 | 398 | - | - | |
Hepe08g1288 | 421 | SUPERFAMILY | Leucine zipper domain | 343 | 391 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1288 | 421 | SMART | brlzneu | 339 | 403 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1288 | 421 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 29 | 420 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g0116 | Hepe-Chr6:3874711 | Hepe08g1288 | Hepe-Chr8:14310396 | 2.58e-07 | dispersed | |
Hepe08g0222 | Hepe-Chr8:1966450 | Hepe08g1288 | Hepe-Chr8:14310396 | 4.94e-23 | dispersed | |
Hepe08g1288 | Hepe-Chr8:14310396 | Hepe09g1015 | Hepe-Chr9:10495142 | 6.97e-21 | dispersed | |
Hepe06g0902 | Hepe-Chr6:56328063 | Hepe08g1288 | Hepe-Chr8:14310396 | 1.08e-12 | transposed | |
Hepe02g0593 | Hepe-Chr2:6083631 | Hepe08g1288 | Hepe-Chr8:14310396 | 2.72e-107 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56202 | PF00170 | bZIP_1 | 5.00E-13 | CL0018 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1288 | K14432 | - | csv:101223043 | 636.721 |