Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1288 ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGAGGAGGTGGAGGAGCTCCGGCGAACTATCCATTAGCACGGCAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGCATGGGGAGTATAGGCAAAGATTTTGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACAATGGCAACTTCTGCTGCTGCTGCTGCTGCTGCTGCTGTCGCCGCTGCTACTGCTGCGGCTGCTGCTAGTAAAGAAGGGACTGGTAGTGGTGGGTATTTGCAGAGACAGGGCTCTTTGACTCTGCCTCGGACACTCAGCCAGAAGAAGGTGGATGATGTATGGAAGGACATACTCAATGAACATGGTGGTGTTAAAGATGGGAATATTGTTGCTTCTAATTTGCAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTTGTGAGAGAGGATACTCAGGTGACTGCAAATCCCAACAATGGAGGGTTCTTTGGCAATAACAACACTGCTTTTGGAATTGATTTTCAGCAGAGGCAGGCTAAAATCCCTGAGAATAACAATCACCTTCCGATTCAATCGTTGAATGCCAATGGAGTTAGAGCACATCAGCCGCAGCCAATATTTCCAAAGCAGCCTACTGTGACCTATGGATCTCAGTTGCCTTTACCCAGTGATGGTCAGCTTCAGCTAGCTAGTCCAGGAATTAGAGGTGGGATTATGGGTATTGCAGATCAAGGGTTGAGCACAAATTTGATGCAAGCCTCTGCACTGCAGGGTGGAAGGATGGGAGTGGTTAGTTTAGCAGCTGGGCCGATGCCTATTGCGACAGGATCTCCAGCGAACCAACTATCATCTGATGGGATCGGAAAGAGCAATGGCGATACCTCATCCGTGTCTCCGGTGCCTTACACGCTTAATAGTGGATTCAGGGGGAGGAGAAGTAATGGGACTGTCGACAAAGTCGTCGAGAGGAGGCAACGGAGAATGATAAAGAACAGAGAGTCAGCTGCTAGATCGCGGGCTCGAAAGCAGGCTTACACGATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAGCAGGCAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAAGTAACGGATAAGCAACAAGGAGGCAAGAAGCTATGCTTAAGACGAACGCAGACGGGTCCATGGTGA 1266 48.58 MNFKDFGNDPSAGNGGGGGGAPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMATSAAAAAAAAVAAATAAAAASKEGTGSGGYLQRQGSLTLPRTLSQKKVDDVWKDILNEHGGVKDGNIVASNLQQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNNTAFGIDFQQRQAKIPENNNHLPIQSLNANGVRAHQPQPIFPKQPTVTYGSQLPLPSDGQLQLASPGIRGGIMGIADQGLSTNLMQASALQGGRMGVVSLAAGPMPIATGSPANQLSSDGIGKSNGDTSSVSPVPYTLNSGFRGRRSNGTVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQKNRALEVTDKQQGGKKLCLRRTQTGPW 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14310396 14314000 + Hsped.08g12880.1 Hepe08g1288 577260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1288 421 Coils Coil 359 396 - -
Hepe08g1288 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 341 392 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1288 421 Gene3D - 341 398 - -
Hepe08g1288 421 MobiDBLite consensus disorder prediction 401 421 - -
Hepe08g1288 421 CDD bZIP_plant_BZIP46 343 395 - -
Hepe08g1288 421 MobiDBLite consensus disorder prediction 296 320 - -
Hepe08g1288 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 346 361 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1288 421 Pfam bZIP transcription factor 343 395 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1288 421 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 341 398 - -
Hepe08g1288 421 SUPERFAMILY Leucine zipper domain 343 391 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1288 421 SMART brlzneu 339 403 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1288 421 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 420 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0116 Hepe-Chr6:3874711 Hepe08g1288 Hepe-Chr8:14310396 2.58e-07 dispersed
Hepe08g0222 Hepe-Chr8:1966450 Hepe08g1288 Hepe-Chr8:14310396 4.94e-23 dispersed
Hepe08g1288 Hepe-Chr8:14310396 Hepe09g1015 Hepe-Chr9:10495142 6.97e-21 dispersed
Hepe06g0902 Hepe-Chr6:56328063 Hepe08g1288 Hepe-Chr8:14310396 1.08e-12 transposed
Hepe02g0593 Hepe-Chr2:6083631 Hepe08g1288 Hepe-Chr8:14310396 2.72e-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56202 PF00170 bZIP_1 5.00E-13 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1288 K14432 - csv:101223043 636.721