Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1309 | ATGGGCGGGTTTAATTTTGGAAGGCAATTTCAAAGCGAAAAAATAAAAAAGTTGGAATACCCGGGAAAACCAAAACTAAAAATATTAAAATTAAAAAAACATTTCAAACCCCAAATTCCAAATTGCAAAAAAATTGGCTCTCTCTTTCTCAGTAGCGCGAAATCGTTTTTCTGCGTTTTTCGCTTTTCAAAACCTCAGCAAAAAAATGGCGGTCTTCTTCTTCTTCCTCCTAAATTCCTTTTCCCTTCTCTACAAAGTCCCCTTCACATCTCCTTCTCCTACTCACCCTTTGATTTTTCTCTCTCCGTATCTCTCTCGGTTTCGATTTCGATTTCAATTTCCTATCCAATGGCCGAGACAGATAATTGTGTCCGTGTTACTCGCGCTTCTAACAAGCGAGCTGGGACGGCCGCCATGCCCGAGGATCAATCCGCCAATAAAAAGCGGGTGGTTCTCGGAGAACTTTCTAACATTCAGAATGTTACTCGCTCACTCCCACAGAAGAGGAGGGCAAAATCCCAGATTACCAAATGCAAACCCAAGAAGAGAACTAAGATTACTGCTGCTCCAACGACCAAGGCGACTGTTGTTGTTGAAGATGATAATGATCCCAACTTGACTGTTGATGATATTCTGGACGACCCAGAAATGAAAAACCCTTATTCCTCCGATATTTATGCTTATCTTCGTAAAATGGAGGCGGAACCGAAAAGAAGGCCGATTCCAAATTACATAGAGAAGATTCAGACGGATGTAAGTGCTAATATGAGAGGGGTTTTGGTTGATTGGATGGTTGAAGTTGCTGAGGAATACAAACTCGGCTCGGATTCTCTGTATCTGTCCATCTCTTACCTCGATAGGTACCTATCAATGAACATCCTCAGTAGGCAAAGACTTCAATTATTGGGGGTTTCGGCAATGCTTATTGCCTCGAAGTATGAAGAGATCACTCCTCCAAACGTGGAGGATTTCTGTTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAGATGGAGGCTGATATACTCAAGTCTTTGAACTTTGAGATGGGAAATCCTACTGCCAAGACGTTCTTGAGGAGGTTCACTAATATTGCTCAAGAAGATTTCAAAGTACCAAATCTACAGTTGGAATTTCTGGGTTATTACCTTGCTGAGCTTAGCCTACTGGACTATAATTTTGTCAAGTTCTTGCCTTCTTTGATTGCTTCATCAGTTGTATTTCTTACTAAATTTATCATCCAGCCAAAGCTGCATCCTTGGGGTTCAAACTTGCAAAAATACACAGGCTACAAGCCAGCTGATCTGAGGCCATGTGTCCTTCTTTTACATGATTTGTATATGGCCAGAAGAGGGGGATCTCTGATTGCTGTGAGAGAAAAATACAAGCTACATAGGTTCAAATGTGTGGCAATGATGCCTTCACCCCCTGAGATACCGTTTTCCTACTTCCAAGAAGCTTAG | 1470 | 41.5 | MGGFNFGRQFQSEKIKKLEYPGKPKLKILKLKKHFKPQIPNCKKIGSLFLSSAKSFFCVFRFSKPQQKNGGLLLLPPKFLFPSLQSPLHISFSYSPFDFSLSVSLSVSISISISYPMAETDNCVRVTRASNKRAGTAAMPEDQSANKKRVVLGELSNIQNVTRSLPQKRRAKSQITKCKPKKRTKITAAPTTKATVVVEDDNDPNLTVDDILDDPEMKNPYSSDIYAYLRKMEAEPKRRPIPNYIEKIQTDVSANMRGVLVDWMVEVAEEYKLGSDSLYLSISYLDRYLSMNILSRQRLQLLGVSAMLIASKYEEITPPNVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRRFTNIAQEDFKVPNLQLEFLGYYLAELSLLDYNFVKFLPSLIASSVVFLTKFIIQPKLHPWGSNLQKYTGYKPADLRPCVLLLHDLYMARRGGSLIAVREKYKLHRFKCVAMMPSPPEIPFSYFQEA | 489 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 14807717 | 14812514 | - | Hsped.08g13090.1 | Hepe08g1309 | 577281 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1309 | 489 | CDD | CYCLIN_AtCycA-like_rpt2 | 355 | 469 | - | - | |
Hepe08g1309 | 489 | SUPERFAMILY | Cyclin-like | 213 | 352 | IPR036915 | - | |
Hepe08g1309 | 489 | SMART | cyclin_7 | 262 | 346 | IPR013763 | - | |
Hepe08g1309 | 489 | SMART | cyclin_7 | 359 | 447 | IPR013763 | - | |
Hepe08g1309 | 489 | Gene3D | - | 224 | 474 | - | - | |
Hepe08g1309 | 489 | SUPERFAMILY | Cyclin-like | 355 | 480 | IPR036915 | - | |
Hepe08g1309 | 489 | ProSitePatterns | Cyclins signature. | 257 | 288 | IPR048258 | - | |
Hepe08g1309 | 489 | FunFam | Mitotic cyclin 6 | 240 | 340 | - | - | |
Hepe08g1309 | 489 | MobiDBLite | consensus disorder prediction | 170 | 186 | - | - | |
Hepe08g1309 | 489 | Gene3D | - | 240 | 353 | - | - | |
Hepe08g1309 | 489 | SMART | Cyclin_C_2 | 355 | 478 | IPR004367 | - | |
Hepe08g1309 | 489 | Pfam | Cyclin, C-terminal domain | 355 | 477 | IPR004367 | - | |
Hepe08g1309 | 489 | Pfam | Cyclin, N-terminal domain | 224 | 352 | IPR006671 | - | |
Hepe08g1309 | 489 | PANTHER | CYCLINS | 199 | 465 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Hepe08g1309 | 489 | MobiDBLite | consensus disorder prediction | 164 | 186 | - | - | |
Hepe08g1309 | 489 | FunFam | Cyclin A1 | 342 | 474 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g2221 | Hepe-Chr2:62982401 | Hepe08g1309 | Hepe-Chr8:14807717 | 1.11e-93 | dispersed | |
Hepe03g1583 | Hepe-Chr3:72721886 | Hepe08g1309 | Hepe-Chr8:14807717 | 2.56e-90 | dispersed | |
Hepe08g1309 | Hepe-Chr8:14807717 | Hepe08g1314 | Hepe-Chr8:14928233 | 5.48e-247 | dispersed | |
Hepe08g1309 | Hepe-Chr8:14807717 | Hepe08g1310 | Hepe-Chr8:14851347 | 1.36e-250 | tandem | |
Hepe01g1808 | Hepe-Chr1:83084556 | Hepe08g1309 | Hepe-Chr8:14807717 | 2.16e-159 | wgd | |
Hepe02g0630 | Hepe-Chr2:6598898 | Hepe08g1309 | Hepe-Chr8:14807717 | 2.07e-97 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1309 | K06627 | - | csv:101206145 | 632.484 |