Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1336 ATGCTGTGCGCTTGTTCAGGAGAGCAATTCAAGTTCGAAGAGCCACCGCAGTCCCCAGAGTCACTTGCGACGAGGGATTTCTCGGCCAGTTGCCTTTCCTCGAGAACTGGAGACTGGGATTTGAAATTTGAAGATTCTCAAGTAGATGAAGTTGAATCCACTTTAAGAGAAGCCCTCTCATTGAACTACGAGGAAGCCAGAGCTTTGCTGGGGAGGCTTGAGTATCAAAGAGGAAATTTTGATGCTGCCCTACAGGTATTTCAAGGTATAGACATTAGATCTTTGACGCCAAGAATGATTAAGGCAATCGCTGAAAAGATAAGGGAGGAAAAGCCTCGTTCTAAAGGTGACAGTGCCCTCCCTAGTGGTGCAATGTCCATGCATTCTGTTAGTCTGCTACTTGAAGCAATTTTACTCAAGGCAAAATCACTGGAGGAACTTGGCAGATATATAGAGGGTGCGAAAGAGTGCAGGATAATTCTTGATACAGTGGAATCAGCTCTGCCTAATGGAATGCCTGAGTGCATTGGTGAAGACTGCAAATTGCAGGAAATGTTTCACAAAGCTTTGGAATTACTACCTGCTTTGTGGATTAAGGGAGGGTATCTTGACGAGGCCATAAATGCCTATCGTCGGGTCCTTGTTAAACCATGGAATTTAGATCCAAACAAGTTGGCTGCCATACAGAAAGAATTGGCTGGCACATTACTCTATGGAGGTGTTGAAGCAAGCCTTCCCCTCAAGTTTCATGTATTTGGTCCAAGAACACCTAAAAACAATGTAGAAGAAGCAATCCTTTTGTTGCTAATACTCATGAGGAAAGTGGTGATGCAGGAAATAAACTGGGATCCAGAGATTATGAATCATCTGACTTATGCATTTTCCATCACTAGTCAATTTGAATTACTCGCTGAGCATGTGGAGCAGATCCTTCCTGGAATATATGGTCGAGCTGAGAGGTGGTACTTTCTCGCTCTTTGTTACAATGCAGCAGGACAGAACGAAACAGCTTTGAACCTTCTAAAGAAAGTTTGCGGTTCCTCTGAAGTAAAGCACAAGCCCCATTTTCATTCTTTTTTGTTGCTTGCAAAATTGTGTTTAGAGGATACAAAATATGCACGCGATGGAATTAAATATGCTCGTAGAATGATTGATATGGCCAGTGAACAAAGTAAACATTTCAATTCGGAAGCCCACAAATTTTTAGGTGTTTGCTATGGGAATGCAGCTAGAGCTTCTGTATCAGACTCTGAAAGAACTCTTTTCCAAAAAGAATCATTGAACTCCCTACGAGTTTCTTCTCTCAGTGGGAGTCATGATCCAGAAGTAATGTTCAACATTAGTTTAGAAAATGCTGTGCAGAGAAATCTCGATGTTGCCTTCTACAGTGCAATGGCGTTCTCAAATATGGTGGCTGATGGTTCCGGAAAAGGTTGGAAGCTATTGACCCTCATACTTTCGGCTGAGAGGCGACTCAAGGACGCCGAAACCATAGTTGATTTTGCTTTGGACGAAGCTGACAGGATGGATCAATTGGATTTTCTTCGATTGAAAGCTGTACTCAAAATTACTCAGGAACAGCCAAAGCAAGCAATAGAAACCTACAGAATCTTGCTAGCTCTAATTCAAGCACGAGAAGAACTTCACCTTCAGGCTAAGAACTTTGACCAATCCAAGGACTTGGAACTAGAGGCAGCGGCAGAACGTAACTTGGAACGGGCAGCCTGGCAGGATTTGGCTGCCATATATTCAAAATTTGCTTCCTGGGCGGATGCAGAAATTTGCCTGAACAAAGCCAAGTCATTAGATGTTCATTGCCCCAGAGGTTGGCATACAACAGGCAAGTATTTCGAAGCTCGATCGTTACACAAGGAAGCCCTTGTTTCATTCTCAGTCTCTCTATCGATCGATCCTGATTATGTTCCGAGTATCATCTCAACAGCAGAAGTATTGATGAAATGCGGTAACCAATCACTTCCAATTGCACGCAGCTTGTTAATGAATGCTGTAAGATTGGATCCTACAAGCCATGAAGCATGGTTCAATCTTGGAGTGGTCTCCAAAATGGAGGGTCTGTTGCTACAAGCTGCAGATTTTTTTCAAGCTGCACATGAACTCCAACTAACTGCTCCTCCTCAGAGTTTCGTCTAA 2151 43.14 MLCACSGEQFKFEEPPQSPESLATRDFSASCLSSRTGDWDLKFEDSQVDEVESTLREALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRSLTPRMIKAIAEKIREEKPRSKGDSALPSGAMSMHSVSLLLEAILLKAKSLEELGRYIEGAKECRIILDTVESALPNGMPECIGEDCKLQEMFHKALELLPALWIKGGYLDEAINAYRRVLVKPWNLDPNKLAAIQKELAGTLLYGGVEASLPLKFHVFGPRTPKNNVEEAILLLLILMRKVVMQEINWDPEIMNHLTYAFSITSQFELLAEHVEQILPGIYGRAERWYFLALCYNAAGQNETALNLLKKVCGSSEVKHKPHFHSFLLLAKLCLEDTKYARDGIKYARRMIDMASEQSKHFNSEAHKFLGVCYGNAARASVSDSERTLFQKESLNSLRVSSLSGSHDPEVMFNISLENAVQRNLDVAFYSAMAFSNMVADGSGKGWKLLTLILSAERRLKDAETIVDFALDEADRMDQLDFLRLKAVLKITQEQPKQAIETYRILLALIQAREELHLQAKNFDQSKDLELEAAAERNLERAAWQDLAAIYSKFASWADAEICLNKAKSLDVHCPRGWHTTGKYFEARSLHKEALVSFSVSLSIDPDYVPSIISTAEVLMKCGNQSLPIARSLLMNAVRLDPTSHEAWFNLGVVSKMEGLLLQAADFFQAAHELQLTAPPQSFV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15327637 15332662 + Hsped.08g13360.1 Hepe08g1336 577308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1336 716 Gene3D Tetratricopeptide repeat domain 256 541 IPR011990 GO:0005515(InterPro)
Hepe08g1336 716 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Hepe08g1336 716 SMART tpr_5 512 545 IPR019734 GO:0005515(InterPro)
Hepe08g1336 716 SMART tpr_5 318 351 IPR019734 GO:0005515(InterPro)
Hepe08g1336 716 SMART tpr_5 677 710 IPR019734 GO:0005515(InterPro)
Hepe08g1336 716 SMART tpr_5 573 606 IPR019734 GO:0005515(InterPro)
Hepe08g1336 716 SMART tpr_5 607 640 IPR019734 GO:0005515(InterPro)
Hepe08g1336 716 SUPERFAMILY TPR-like 46 343 IPR011990 GO:0005515(InterPro)
Hepe08g1336 716 Gene3D Tetratricopeptide repeat domain 542 709 IPR011990 GO:0005515(InterPro)
Hepe08g1336 716 Coils Coil 485 505 - -
Hepe08g1336 716 Gene3D Tetratricopeptide repeat domain 29 242 IPR011990 GO:0005515(InterPro)
Hepe08g1336 716 SUPERFAMILY TPR-like 308 542 IPR011990 GO:0005515(InterPro)
Hepe08g1336 716 SUPERFAMILY TPR-like 512 688 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1909 Hepe-Chr6:70244692 Hepe08g1336 Hepe-Chr8:15327637 8.36e-180 dispersed
Hepe08g1336 Hepe-Chr8:15327637 Hepe05g1675 Hepe-Chr5:66675980 4.23e-185 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1336 K21843 - csv:101209448 1300.03