Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1355 ATGAGCACCAGTGACAAAAGGACAGCTCTGATTCAGGCAGAGGGAAGCAACGGTAGGCGATGGGGCTCTAGAAGAAGAGAAGAAGAAGAGAAGATGAAGTCTATGAATGAGAGTGATAACAATAACAACAATAATAATAGTTGGTTGGGATTCTCTCTTTCACCCCACATGAAAATGGAGGACCATCATCATCATCAACAACAACACACTCATGATCCGTACAACAATCACCACCATACTCACACTGCTCCTCCAAATACCTTCTACTTCTCCCCTCACCCTCATTACAACAACAACAACACTGAGATTTTCTATGGTAATATTGCTGAAAATGCCCCTCTTCATCACTCTGCTGCTGCTTCCCTCTCTGTAATGCCACTCAAATCCGACGGCTCTCTCTGTATCATGGAAGCCCTTTCAAGATCCCAACCCGAAGGGATGGTGCCGAGTTCTTCACCGAAGCTAGAGGATTTTCTTGGGGGTGCAACAATGGGAGGTGGTGGTCGAGGCTATTTCAATCAAAATGCCGAATCCGAACCCGACAGGGAACATTCCTTGGACCTTCTTCACCGACCCATTAGACAGAATCAACAACAGATTCTAATGCAAAATTCCCATCAATTTTACTCTGCTTTAGTCCCATCTTCCATTGGAATTGGAACTTGCGATCCCCAAATTCTACACCCGAATGAAGACCACCAAATCCCTTGCCTTAGAAACTGGGTCTCTCGTTCCCACTACGCCGCCACCGCCCATAACACTCTCGAGCAGCATATTAGCGGCGGTGGAGGTCTCGTCAATGACGGTGGCTCTGCCTCCATTGGCGGAATGAGCTGCGGGGAATTGCAGTCGTTGAGTTTGTCGATGAGCCCAGGTTCTCAATCCAGCTCGTTCACGGCTTCCAGTCAGATCTCACCCACCGGAGCCGACGTCGCCGCTGTGGAAACTAAAAAAAGAGGCCCAGGAAAACTCTGCCAGAAACAGCCCGTTCACCGCAAGTCTATTGATACTTTTGGTCAAAGAACCTCCCAATATCGTGGCGTCACCAGACATAGGTGGACTGGGAGATATGAAGCTCATCTCTGGGATAATAGCTGCAAAAAAGAAGGCCAAACCAGAAAAGGAAGACAAGTTTATCTGGGAGGATATGATATGGAAGAAAAAGCTGCAAGAGCTTACGATCTTGCCGCCCTCAAGTACTGGGGACCCTCCACCCATATTAACTTTCCCTTGGAGAATTACCAGACTGAAGTTGAAGAAATGAAGAATATGAGCCGCCAAGAATATGTTGCCCACTTGAGAAGGAAAAGCAGTGGCTTTTCGAGGGGCGCTTCAGTATTCCGTGGAGTCACAAGACATCACCAACATGGAAGATGGCAGGCTAGGATTGGGAGAGTTGCTGGAAACAAAGATCTTTATCTTGGAACATTTAGCACGCAAGAGGAAGCGGCTGAGGCTTATGACATAGCAGCAATCAAATTCCGCGGTGTAAATGCAGTCACCAACTTTGACATTTCCAGATATGATGTCGAGAGAATCATGGCTAGTAGTACCCTACTCGCAGGCGAGCTTGCCCGAAAGAACAAGGACGTCGTCGACACCACCAGCAACGTTGCCGCTATCACCTACGACTCGTCCTCCTCCGCCACGCCAAATAACAATGGTGGGATCGGGATCGGGATTGGGATCGAGATCGACGACAATGTTGCCAATGGGAATGGTACTGATTGGAAGATGGCATTGTATCAAAATCCATCACATCAGCAACAGGCAGCTGCTGCTGCTTGTGTTGCTGAATCACTGGAGGATCATCATCATCATCATCACCATCACAACAAGTCCATGGCTGCCGCGGCGGAAGGCTATCGAAACGCTTCGTTTTCTATGTCGTTGCAGGATTTGATTGGGATGGAATCATTGAACTCTAATGGTCATGGTATTGAAGATGACGTGAGCAAACAAGTGACTCATTTTTCGAATTCGTCGTCGCTGGTGACGAGTTTGAGTAGCTCGAGAGAAGGAAGTCCAGACAAGACGAACGTGTCAATGCCATTTGCAAAGCCCCCGCCCCTGATGACATCGTCGAAACTACTCGGTGCAACGAGCGGGGTCGGGTCATGGTACCCATCCCCACAGCAGCTGAGGCCAACAGCCATATCCATGGCACATTTGCCTGTTTTTGCAGCTTGGAATGACACTTAA 2202 48.41 MSTSDKRTALIQAEGSNGRRWGSRRREEEEKMKSMNESDNNNNNNNSWLGFSLSPHMKMEDHHHHQQQHTHDPYNNHHHTHTAPPNTFYFSPHPHYNNNNTEIFYGNIAENAPLHHSAAASLSVMPLKSDGSLCIMEALSRSQPEGMVPSSSPKLEDFLGGATMGGGGRGYFNQNAESEPDREHSLDLLHRPIRQNQQQILMQNSHQFYSALVPSSIGIGTCDPQILHPNEDHQIPCLRNWVSRSHYAATAHNTLEQHISGGGGLVNDGGSASIGGMSCGELQSLSLSMSPGSQSSSFTASSQISPTGADVAAVETKKRGPGKLCQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTEVEEMKNMSRQEYVAHLRRKSSGFSRGASVFRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASSTLLAGELARKNKDVVDTTSNVAAITYDSSSSATPNNNGGIGIGIGIEIDDNVANGNGTDWKMALYQNPSHQQQAAAAACVAESLEDHHHHHHHHNKSMAAAAEGYRNASFSMSLQDLIGMESLNSNGHGIEDDVSKQVTHFSNSSSLVTSLSSSREGSPDKTNVSMPFAKPPPLMTSSKLLGATSGVGSWYPSPQQLRPTAISMAHLPVFAAWNDT 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15751383 15756003 + Hsped.08g13550.1 Hepe08g1355 577327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1355 733 SUPERFAMILY DNA-binding domain 343 412 IPR016177 GO:0003677(InterPro)
Hepe08g1355 733 MobiDBLite consensus disorder prediction 37 52 - -
Hepe08g1355 733 FunFam AP2-like ethylene-responsive transcription factor ANT 343 412 - -
Hepe08g1355 733 SMART rav1_2 446 510 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 SMART rav1_2 344 416 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 SUPERFAMILY DNA-binding domain 445 506 IPR016177 GO:0003677(InterPro)
Hepe08g1355 733 MobiDBLite consensus disorder prediction 664 688 - -
Hepe08g1355 733 MobiDBLite consensus disorder prediction 56 78 - -
Hepe08g1355 733 CDD AP2 445 506 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 Pfam AP2 domain 445 496 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 Pfam AP2 domain 344 402 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 ProSiteProfiles AP2/ERF domain profile. 344 410 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 MobiDBLite consensus disorder prediction 19 36 - -
Hepe08g1355 733 PRINTS Ethylene responsive element binding protein signature 345 356 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 PRINTS Ethylene responsive element binding protein signature 486 506 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 MobiDBLite consensus disorder prediction 1 88 - -
Hepe08g1355 733 Gene3D AP2/ERF domain 446 506 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 Gene3D AP2/ERF domain 343 412 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 182 583 - -
Hepe08g1355 733 FunFam AP2-like ethylene-responsive transcription factor 445 506 - -
Hepe08g1355 733 ProSiteProfiles AP2/ERF domain profile. 446 504 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 CDD AP2 343 410 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe08g1355 733 MobiDBLite consensus disorder prediction 664 678 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1355 Hepe-Chr8:15751383 Hepe08g1835 Hepe-Chr8:45654109 3.39e-105 dispersed
Hepe02g1531 Hepe-Chr2:20239052 Hepe08g1355 Hepe-Chr8:15751383 8.93e-124 transposed
Hepe01g1850 Hepe-Chr1:83397307 Hepe08g1355 Hepe-Chr8:15751383 5.42e-69 wgd
Hepe04g1342 Hepe-Chr4:69024398 Hepe08g1355 Hepe-Chr8:15751383 4.92e-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56214 PF00847 AP2 1.70E-13 CL0081 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1355 K09285 - csv:101212797 1003.82