Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1370 ATGATCTCTGAATCAATGCTCCTTAATCCAACGGCCCACATTTCATCCTGGGACTCCCTCGATGATCCCTCCGCCGCCGCATTCCCCTCCTTTTTCACTGCCGGCCTCGACTCTCCCACGGCGGCCGTCATGGACTTCGATTCCCCATTCTGGGAGGATCACGATCTCCCGGCGGCAGCGGCGGGCGTCTTCTCCTGCGACAATTTCCGAATGTACGAGTTCAAAGTCCGCGCCTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAACTATTCCGGCGCCGAGTGCCAGGATTTACGTCATGGGTGTTGTATTAAAGGGGACGCCTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCATCCGGACCGATACCGGACTCAGCCGTGCCGTGACGGAACCGGCTGCCAGCGACGGGTCTGTTTCTTCGCCCACACCTCGGAGCAACTCCGGATTCCGGCGAAACAGAGCCTCAGGTCTCCACGGGCCAGGGAAATCACCGGCCCTACTGTATCATCGCCGACGTCGATCCTAATCTCGCCGTCGTTGGACTCGCCGCCGATGTCTCCGATCAGCCCTGTAACTACCGGTGGTAGCGAATCGTTCAGCAGGCTAGTGACATTGATGTACAATCTCCAGCTTGATGAATTAAAGACGAAACCGGCGGTCTCCGGGTTCGGTTCAAGTCTCCGGCAGAGGTCAGGCGGATTTGATCTGTGGGACTATTAG 786 58.27 MISESMLLNPTAHISSWDSLDDPSAAAFPSFFTAGLDSPTAAVMDFDSPFWEDHDLPAAAAGVFSCDNFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGAECQDLRHGCCIKGDACEYAHGVFEIWLHPDRYRTQPCRDGTGCQRRVCFFAHTSEQLRIPAKQSLRSPRAREITGPTVSSPTSILISPSLDSPPMSPISPVTTGGSESFSRLVTLMYNLQLDELKTKPAVSGFGSSLRQRSGGFDLWDY 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16076543 16077328 + Hsped.08g13700.1 Hepe08g1370 577342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1370 261 MobiDBLite consensus disorder prediction 176 196 - -
Hepe08g1370 261 ProSiteProfiles Zinc finger C3H1-type profile. 108 135 IPR000571 GO:0046872(InterPro)
Hepe08g1370 261 Gene3D - 104 177 - -
Hepe08g1370 261 PANTHER UNKEMPT FAMILY MEMBER 52 218 IPR045234 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1370 Hepe-Chr8:16076543 Hepe08g2641 Hepe-Chr8:68409621 1.98e-67 dispersed
Hepe01g1861 Hepe-Chr1:83561963 Hepe08g1370 Hepe-Chr8:16076543 1.22e-77 wgd
Hepe08g1370 Hepe-Chr8:16076543 Hepe09g0842 Hepe-Chr9:8293413 1.58e-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56218 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1370 - - - 0.0