Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1388 ATGTTGAAGGTATCAATATCATCCTCATCTCACCGTATTTTCATCTTCATCTCTTTCCTCTGCTCTACGCGGTTGCTGCTTTCTTCCACCGCTCTCCCCCTCCCCGACTCGGATCAGCCACTTCTCGCTAATTCCACCCTCCACTCCAACAACGTATCCATTCCGAGGAATAAGGAGGGCAGTTTTGCTGACATCATTGATCGTGCTTTGGAGAATGAGTTCAAGGAGAATGACCAGAATGAAGCAATTGATGCAGGAGGCTTCAACAACAGCGTAGCAGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGACAAAGAAAAATGATACAAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGAAAGGATAACGTCTTTATCATATCTAACTTTAAATCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTCATTGTCTCTGCAACTTGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTAGCTCAGTTTGGTGTAATTTTTCTTCTTTTTGCTCTGGGGTTGGAGTTTTCGACAGCTAAGCTTCGAGTTGTTCGTGCAGTTGCTGTTCTCGGTGGCCTGCTCCAAATTTTCCTATTTATTTGCCTCAGTGGGATCATAGCCTCGTCATGTGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCATTCCTATCGATGTCCTCAACAGCAGTGGTGCTGAAGTTTTTGATGGAAAAGAACTCGACAAATGCTCTTCATGGACAAGTCACGATCGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTGGGTGGGAATTCTGGTATTCTTCAAGGAGTGATGTCCATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTTTGGTTGTTTTGTCAATTTTAACCCGTACATGTGTTCCTTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGACTAATGAACTCTATCAATTAGCCTCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACATACACTCGAACAAATAGAGCCTATAAGGAACTTTTTTGCGGCCCTTTTTCTTGCTAGCATTGGAATGCTGATCCACGTTCAGTTTTTGTGGAACCATGTTGATATATTACTGGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGGTATAACAATAGGACAGCACTTCTGGTTGGAATGTCTCTGGCTCAGATAGGGGAATTTGCTTTTGTTCTTCTCAGCCGTGCGTCTAATGTTCATCTAGTTGAGGGGAAACTGTATCTGTTGCTTATTGGGACCACAGCTCTCAGTCTGGTGACAACTCCTTTTCTTTTCAAGTTAATACCTGCTGTAGTGCATTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGATAGTCTCGTCGAGATTGGATTTAAAGGAGACATCATCCGCTCAGAAAGTGTAAAGCAGCGTGTTATGTTGATAGTCCAGGGAGCTCATGATTCATGA 1761 43.04 MLKVSISSSSHRIFIFISFLCSTRLLLSSTALPLPDSDQPLLANSTLHSNNVSIPRNKEGSFADIIDRALENEFKENDQNEAIDAGGFNNSVAEQQAVLETVARVKTKKNDTKEEKFQLQNVFNLDSDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAVLGGLLQIFLFICLSGIIASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVMSMSKVLVILVTFLVVLSILTRTCVPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTALLVGMSLAQIGEFAFVLLSRASNVHLVEGKLYLLLIGTTALSLVTTPFLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSESVKQRVMLIVQGAHDS 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16310091 16322435 - Hsped.08g13880.1 Hepe08g1388 577360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1388 586 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 47 569 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Hepe08g1388 586 Gene3D - 161 544 IPR038770 -
Hepe08g1388 586 Pfam Sodium/hydrogen exchanger family 171 537 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0686 Hepe-Chr2:7532367 Hepe08g1388 Hepe-Chr8:16310091 8.93e-31 transposed
Hepe05g1930 Hepe-Chr5:69608796 Hepe08g1388 Hepe-Chr8:16310091 1.77e-38 transposed
Hepe07g0220 Hepe-Chr7:2106770 Hepe08g1388 Hepe-Chr8:16310091 3.87e-226 transposed
Hepe08g1388 Hepe-Chr8:16310091 Hepe09g0861 Hepe-Chr9:8516677 7.02e-291 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1388 K26735 - csv:101217282 1004.2