Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1405 ATGGGGTGTCTCAGGAAATTTAAGGGTGCTGATGTTCCAACCAGCGTAATAAAAACTGCCCCGGAATTTTGTTCTGTGTATGTAATATCAAAAGGGAAGATAATATCTGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCCATGCCACCAAGACAACCATCGCCGCTTGCAATGCAGCCAAACGTTCAACCAGACAACAGCAACGAACAAGAAAATGGAGCCAAAGGGCAACCAGCAAGGGAAGGATGGAAAAGTGCAGGTTCAGAGAGAATGCTCAATGATAGGAATGGTGGAAAACCAGCAAAAGCATTGACCCGTGAGAGGCCAAAAACTTCTCCGTCTAATATATCATTGGAAAATATAGAGGCTCCAAATCGAGCGTCTAGGTCTTCATTTAGCCGTGAGTCAATCTCTGATGACACTATGTTTAGTGCACAGATGGCTTTTGGTTCATTGGATGTGAGTGGTCAAAATTTAGATTTCAGTATTACCTCAAATTCGTCAATGGACTCTGCTTCCGCACAATCTACTCGAGAACTAGAGGCTGAGATGAAAAGATTGAAGCTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCCTGCAAAGAGGCAATCTCAGCCAAGAACAAGGCTAGAGAACTTAGTCAGTGGAAGCACGATGAGGCACGTAAGTTTGAGGAAGTCAGGCTAGCTGAAGAGGCTGCTCTCGCTATTGCTGAGATGGAGAAAGCTAAGTGCAAAGCTGCCATTGAAGCAGCAGAGGCAGCACAAAAGCTAGCCGAAAGAGAAGCCCAGAGAAGAAAACAGGCTGAAATGAAGGCCAGACGAGAGGCAGATGAGAAAAAACGAGCATTGAGTGCTCTAGCTCAGAATGACGTCCGATATAGAAAATACAGCATAGAGGAGATTGAGGAATCTACTGAAAAGTTCTCTGAAAAATTGAAGATTGGAGAAGGTGGATACGGTCCTGTTTATGGAGGCAAACTTGATCATACAGCTGTTGCGATTAAAGTTTTAAGACCTGATGCTGCTCAAGGACGGAAGCAATTCCAACAAGAGGTGGAAGTCCTCTGTTGCATTAGACATCCAAACATGGTCCTCCTTCTTGGGGCATGCCCGGAGTATGGTTGCTTGGTATATGAATACATGCATAATGGGAGCTTAGAAGACAGACTTTTCCGGAGAGGGAATTCTCCTCCATTATCTTGGAGACGACGATTCAAAGTAGCTGCTGAAATTGCAACCGCACTCCTTTTTCTTCACCAAGCAAAGCCAGAACCTCTTGTGCATAGGGACCTTAAACCAGCTAACATTCTCTTGGACCGCAATTTTGTGAGCAAAATCAGTGATGTTGGCCTGGCCCGGTTAGTCCCGCCTTCTGTAGCTGATCAAGTCACCCAATATCACATGACTTCAGCAGCTGGCACATTTTGTTACATTGATCCTGAGTATCAACAAACAGGAAAGTTAACAACAAAATCAGATATTTACTCGTTCGGAATAATGTTACTTCAAATTATTACTGCCAAGCCTCCAATGGGTCTGGCTCACCATGTGCAAAGGGCGATTGAGAAAGAGCGGTTTGATGAGATGCTGGATCCTACAATTTTAGATTGTCCATTGGAGGAGGCTATAAATTTTTCAAAACTGGCATTGAAGTGTGCTGAACTGAGGAAGAGAGACAGGCCAGATCTTGGAACAGAAATAGTTCCAGAGCTCAACAGGTTAAGAGATATTGGGAGGAGTTCTGACAAACGTGAGAGCCGGAATCACTATCCACGCTCTTCAGCATCAAGTTCCAGTTCGAGGCCGCAGTCATCAAATGAGGATTCGATAACAAGTTATACTGATGAAGGAAGTTAG 1869 44.52 MGCLRKFKGADVPTSVIKTAPEFCSVYVISKGKIISARAALRPVANTAMPPRQPSPLAMQPNVQPDNSNEQENGAKGQPAREGWKSAGSERMLNDRNGGKPAKALTRERPKTSPSNISLENIEAPNRASRSSFSRESISDDTMFSAQMAFGSLDVSGQNLDFSITSNSSMDSASAQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKHDEARKFEEVRLAEEAALAIAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAEMKARREADEKKRALSALAQNDVRYRKYSIEEIEESTEKFSEKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNSPPLSWRRRFKVAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADQVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKERFDEMLDPTILDCPLEEAINFSKLALKCAELRKRDRPDLGTEIVPELNRLRDIGRSSDKRESRNHYPRSSASSSSSRPQSSNEDSITSYTDEGS 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16575788 16578876 - Hsped.08g14050.1 Hepe08g1405 577377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1405 622 MobiDBLite consensus disorder prediction 595 622 - -
Hepe08g1405 622 Coils Coil 178 198 - -
Hepe08g1405 622 CDD STKc_IRAK 318 578 - -
Hepe08g1405 622 MobiDBLite consensus disorder prediction 578 594 - -
Hepe08g1405 622 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 285 384 - -
Hepe08g1405 622 Pfam Protein tyrosine and serine/threonine kinase 316 567 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g1405 622 SMART serkin_6 312 575 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1405 622 Coils Coil 238 293 - -
Hepe08g1405 622 MobiDBLite consensus disorder prediction 578 622 - -
Hepe08g1405 622 MobiDBLite consensus disorder prediction 59 75 - -
Hepe08g1405 622 MobiDBLite consensus disorder prediction 47 135 - -
Hepe08g1405 622 FunFam U-box domain-containing protein 51 385 585 - -
Hepe08g1405 622 Gene3D Phosphorylase Kinase; domain 1 281 384 - -
Hepe08g1405 622 MobiDBLite consensus disorder prediction 109 135 - -
Hepe08g1405 622 SUPERFAMILY Protein kinase-like (PK-like) 295 567 IPR011009 -
Hepe08g1405 622 Gene3D Transferase(Phosphotransferase) domain 1 385 601 - -
Hepe08g1405 622 PANTHER OS02G0152300 PROTEIN 7 595 IPR051348 -
Hepe08g1405 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g1405 622 ProSiteProfiles Protein kinase domain profile. 312 575 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1405 Hepe-Chr8:16575788 Hepe10g0326 Hepe-Chr10:3479889 1.03e-212 dispersed
Hepe03g1449 Hepe-Chr3:71271991 Hepe08g1405 Hepe-Chr8:16575788 6.54e-189 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73069 PF07714 PK_Tyr_Ser-Thr 4.40E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1405 - - - 0.0