Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1407 ATGGAGGAAATGGTTGTGGTGCCATTTAGGGTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAACCCCCATGGATATCACAAGACTTAAGCTAATGGCAGATACTGCTGGTTTGTTATCTGATTCAGTGACTAAGGCTTCTGATGAACGGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTGGTATTACTACGGTTTCGGTTACGAATGATGACAAGTGCGAAGGAGTTCCATTGTCGGTTGTGTTGTCTCGAAATAATAGCAATTGGGTTGCGGCAGACGAGACGATATCCCATGGAAGTGAGGAAGATGATTCTTTATCTTTAGAGGGCGGTCACATTTACGACAGCTCTTGTTCGCATTCAGTGATTAGTGAGAATAGCAGCATTTGTGGTGATGATTTTTTAGGTTCTGAGGTGTCTTCTTTTGAAGCATTTGATTCGATCAGCAATGCGAAGGACGTTAGCAGTGCTGAAATTGCAGCTAAAGCCAATATTGGAGAGTCTAATATTGAAAATCTTGAGACTCAGGTTGCGAGTTCGTCTTCTGTAGCAGTTAGCCTTGAAGAAGATGTTGGAGATGGGTTAGGCACTGAAGCATGTAATAACATGGTTTTCCAGCTGCCTCTTGAGAAAAGGGCAAGCGAACCAGTTAGTCGAAGTGTTTTTGAGGTAGATTGTGTTCCCCTTTGGGGATTTACATCAGTCTGTGGAAGAAGACCTGAGATGGAAGATGCAGTGGCAACCGTGCCTAGGTTTTCAGAACTTCCTGTCCAAATGCTTATTGGCGACCGAGTTCTTGATGGCTCAAGCAAGGCTATTGCTCACCAAACTGTTCATTTTTTTGGGGTTTATGACGGTCATGGTGGCTCACAGGTCGCAAATTTTTGTCGTGAACGTATGCATTTGGCTCTATCTGAGGAGATTGAACGTACTAAGCAAGATATAGCTGCTGGCAATATGAAGGATAATTGCCAAGAGCTATGGAGAAAGTCATTCACCAAATGTTTTCTAAAAGTTGATGCTGAAATTGGAGGGAGACCTGGTGTTGAGCCTGTTGCGCCAGAAACTGTAGGCTCCACTGCTGTTGTTGCAATTATCTGTGCCTCTCACATTATTGTTGCAAACTGTGGAGACTCGAGAGCAGTTCTTTGTCGTGGGAAGGAGCCAATGGCATTGTCTGTGGATCATAAACCAAACAGAGAAGATGAATACGAAAGGATTGAGGCCGCAGGGGGAAAGGTCATACAGTGGAACGGGCACCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATCGGTGATAGATACTTGAAACCATGGATCATCCCGGAGCCAGAAGTGATGTTCGTCCCTCGGGCGAAAGACGATGAATGCCTCATTCTAGCCAGTGATGGTTTGTGGGATGTGATGACAAACGAAGAGGTATGCGACCTGGCTCGAAGACGAATCCTACTCTGGCACAAGAAGAACGGCGTTGCTTTGCCTTCTGAGAGAGGAGTGGGGATCGATCCTGCAGCCCAAGCAGCCGCAGAATACCTCTCGAACCGAGCGCTTCAAAAGGGCAGCAAAGACAACATCACAGTAATCGTGATTGATTTGAAAGCTCAAAGGAAGTTCAAGACGAAATCATAA 1656 45.41 MEEMVVVPFRVGNSVCDNPNMATPMDITRLKLMADTAGLLSDSVTKASDERTEVGSDDCKSSNGEEEVGITTVSVTNDDKCEGVPLSVVLSRNNSNWVAADETISHGSEEDDSLSLEGGHIYDSSCSHSVISENSSICGDDFLGSEVSSFEAFDSISNAKDVSSAEIAAKANIGESNIENLETQVASSSSVAVSLEEDVGDGLGTEACNNMVFQLPLEKRASEPVSRSVFEVDCVPLWGFTSVCGRRPEMEDAVATVPRFSELPVQMLIGDRVLDGSSKAIAHQTVHFFGVYDGHGGSQVANFCRERMHLALSEEIERTKQDIAAGNMKDNCQELWRKSFTKCFLKVDAEIGGRPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFVPRAKDDECLILASDGLWDVMTNEEVCDLARRRILLWHKKNGVALPSERGVGIDPAAQAAAEYLSNRALQKGSKDNITVIVIDLKAQRKFKTKS 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16615057 16619318 + Hsped.08g14070.1 Hepe08g1407 577379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1407 551 Gene3D - 224 551 IPR036457 -
Hepe08g1407 551 MobiDBLite consensus disorder prediction 46 64 - -
Hepe08g1407 551 SMART PP2C_4 227 539 IPR001932 -
Hepe08g1407 551 SUPERFAMILY PP2C-like 232 542 IPR036457 -
Hepe08g1407 551 PANTHER PROTEIN PHOSPHATASE 186 540 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0009788(PANTHER)|GO:0035970(PANTHER)
Hepe08g1407 551 ProSiteProfiles PPM-type phosphatase domain profile. 237 541 IPR001932 -
Hepe08g1407 551 MobiDBLite consensus disorder prediction 45 65 - -
Hepe08g1407 551 FunFam Protein phosphatase 2C 16 225 551 - -
Hepe08g1407 551 CDD PP2Cc 239 541 IPR001932 -
Hepe08g1407 551 Coils Coil 178 198 - -
Hepe08g1407 551 ProSitePatterns PPM-type phosphatase domain signature. 288 296 IPR000222 GO:0043169(InterPro)
Hepe08g1407 551 Pfam Protein phosphatase 2C 265 534 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1510 Hepe-Chr3:71968227 Hepe08g1407 Hepe-Chr8:16615057 5.39e-67 dispersed
Hepe07g0210 Hepe-Chr7:2014750 Hepe08g1407 Hepe-Chr8:16615057 1.76e-70 dispersed
Hepe08g1407 Hepe-Chr8:16615057 Hepe09g0805 Hepe-Chr9:7890868 1.53e-81 dispersed
Hepe02g1513 Hepe-Chr2:19765725 Hepe08g1407 Hepe-Chr8:16615057 2.42e-182 transposed
Hepe07g0048 Hepe-Chr7:497620 Hepe08g1407 Hepe-Chr8:16615057 4.97e-20 transposed
Hepe03g1010 Hepe-Chr3:55012115 Hepe08g1407 Hepe-Chr8:16615057 9.73e-21 wgd
Hepe08g1407 Hepe-Chr8:16615057 Hepe09g1273 Hepe-Chr9:17359646 2.96e-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1407 K14497 - csv:101207918 1006.9