Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1485 ATGGGCTGCGCCACCTCCAAACTCGACAACCTCCCTGCCGTCGCTCTCTGCCGTGACCGCTGCAAATTTCTTGACCAATCTCTCTCTTTTACCCATACCCTTATCGATTCCCACTCTGCCTATTCTGAATCACTCAACAAAATCGCCTCCGCTCTCCGCCGTTTGTTCGACCAAGACTCCGCCGCCGCCGATTTGAAATGCCCTCCACCGGCTGTTGCACCTTCGTTTCATCCATCTGATTCTGATTCAGATTCTGATTCTGATTCCGAAGAAGAGGAAAATGGGTGTTTTACTCCAGAGAAACCACAATCTTCCCCGATTGGAAATTTCATGTTCTCGAATTACGATTCGGCTAGAGCACAACCGCCGCCGCCGCCACCGACGGGCTCATCGTGGGATATCTTCAATTTCTTCGAAACGTACGAGAGATACGAACAACCCAGTTTCAATTGGGAGCGGGAAGGAGCAGATCCAAAATCAGGAACAACAAGAAAAGTTGTAGCGAAGAAGAAGAAGAACAAGAAACCGGCTGTGGTTGCTGATTCGAAGAAAAATGAGGAACCTGAGAAATTAAACCAACCGGAAAAGAAGATTATTGATGATGATTCAAAGATGGGTGTGTTCGATGTGATGAAAGAAATCAAATGTTCATTTGAAAAGGCATCTGATTCAAGCAATTCCATTTCCAAATTGCTTTCTTATGGCCAAAGAATGAGTTTTTGTAAAGATTCAAGGATGGGATCGCGAGGTTTATTGTCTACTTTGAAGAAGCTGTGTGTTTGGGAGCAGAAGCTGTACCTGGAAGTGAAGGGTGAGGAGAGATTGCGTATGATTATGGAGAAGAAGTGCAGACAGCTGAAGAATTTGGTGGAGAAGAAGGCAGAATCTAGAAAAGTTGATTCCCTTCGAAATTCGATAAGAGATTTGTCGATCAAATTGAAAGTTTCGATTCAGGTGGTTGATAGGATTTCAATTACCACTAGCAAGTTGAGGGATGAAGAGTTTTTGGCAGAGATCATTGAGTTCATTCATGGATTACAAAACATGTGGACAGCCATGTTAGAACATCACAAGCAACAAACTGAAGCACTAACAGACTCCAAACCCTTCGAATCAGTCCTGAATGGCACCCTCGACGACGCCCATCTCGAAGCCGCCATGGATCTAAAACTCGAGCTCGAAACTTGGAGATCAAATTTCATGAATCTAATCACAACCCAAAAGGACTGCATCAAAGCCCTCGACGGTTGGCTTCTCCGCTGCCTATTGTACGAACCGGAGCCCGAAGACACCCCGAACACCGCCTGCCCGCCGCCCTTTTCCCCGGCCAGAATCGGCGCCCCGCCCGTGTTCGTAATCGCCCACCTCTGGTCCGAGACGGCGGACAAATTCTCCGACAACAACGACGTCTCGGAGGCCATAGAGGGGCTTGTCTCGAGTCTGGATCAGGCCTTGGAACAGCAGAGTTTGGATTTGCAGAGATTGGCATTGATGAATAGAGAGATGGAGAGGAAGATTAAGATTAAGAAGATGAGTAGTAGTAGTAGTAGTGAAGGTTTTGAAGAGAAGACGGTGGCGGTGACGGTGGGGACTGTTCATAAAGTGGGTAAGTTTAGTGGCAGTGAGATTCAATTGGGGTTGAGGCAGATTTTTGTGGGGTTGACGAGGTTTTGTGGGGACTCCATTGCAGCTTATGAGGAGCTCTGTAGTTCAGCCATGGAAGAAACGTCTCGAACCAGAGACAAATACGAACAGAGCTAG 1761 47.02 MGCATSKLDNLPAVALCRDRCKFLDQSLSFTHTLIDSHSAYSESLNKIASALRRLFDQDSAAADLKCPPPAVAPSFHPSDSDSDSDSDSEEEENGCFTPEKPQSSPIGNFMFSNYDSARAQPPPPPPTGSSWDIFNFFETYERYEQPSFNWEREGADPKSGTTRKVVAKKKKNKKPAVVADSKKNEEPEKLNQPEKKIIDDDSKMGVFDVMKEIKCSFEKASDSSNSISKLLSYGQRMSFCKDSRMGSRGLLSTLKKLCVWEQKLYLEVKGEERLRMIMEKKCRQLKNLVEKKAESRKVDSLRNSIRDLSIKLKVSIQVVDRISITTSKLRDEEFLAEIIEFIHGLQNMWTAMLEHHKQQTEALTDSKPFESVLNGTLDDAHLEAAMDLKLELETWRSNFMNLITTQKDCIKALDGWLLRCLLYEPEPEDTPNTACPPPFSPARIGAPPVFVIAHLWSETADKFSDNNDVSEAIEGLVSSLDQALEQQSLDLQRLALMNREMERKIKIKKMSSSSSSEGFEEKTVAVTVGTVHKVGKFSGSEIQLGLRQIFVGLTRFCGDSIAAYEELCSSAMEETSRTRDKYEQS 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18405647 18408827 - Hsped.08g14850.1 Hepe08g1485 577457

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1485 586 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Hepe08g1485 586 MobiDBLite consensus disorder prediction 98 116 - -
Hepe08g1485 586 MobiDBLite consensus disorder prediction 174 195 - -
Hepe08g1485 586 Coils Coil 485 505 - -
Hepe08g1485 586 PANTHER UNCHARACTERIZED 1 575 - -
Hepe08g1485 586 MobiDBLite consensus disorder prediction 149 195 - -
Hepe08g1485 586 MobiDBLite consensus disorder prediction 67 132 - -
Hepe08g1485 586 Pfam Protein of unknown function (DUF632) 242 481 IPR006867 -
Hepe08g1485 586 MobiDBLite consensus disorder prediction 149 164 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1485 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0380 Hepe-Chr2:3581748 Hepe08g1485 Hepe-Chr8:18405647 1.33e-69 dispersed
Hepe08g0331 Hepe-Chr8:2969153 Hepe08g1485 Hepe-Chr8:18405647 3.31e-69 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g121 . . . . . . . . Cmo05g01009 . . . . . Sed11g0843 . . Bhi04g01560 Tan02g1536 Cmetu03g1244 . Hepe08g1485 . Lcy13g2249 Cla08g00962 . . . . . . . . Cone17ag1442 Cone20ag0035 . . . Cme03g01356 . . . . . . . . . . . . Cma05g00991 Car05g00873 . Cpe11g00800 . . . . . . . . . . . . . . . Lsi08g00802 . Chy03g00631 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012946 0 1 0 0 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 0 28