Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1508 | ATGGGTTGCTTTTCTTGTATTACTCCTCGTACTCAAGATGGGAGCAGGGTCGAAATTGATGATCATGGTGTTCGATTTGATTCCCGGTATATTGTTAATTCCTCAGGTACATGGAGGGGGAAAGAAGCTCGAATGAGCAGTGAAAGCTGTCCGAAGGGGAAGGGGAGCGTCGCCGCCGCTCGTAGTTTTACGTTCCGTGAACTTGCCACAGCCACAAAAGGTTTCAAGGGAGTGAATTTGCTTGGAGAGGGTGGTTTTGGACGAGTCTACAAAGGACGTTTGGAAACAGGACAGATTGTTGCAGTTAAACAGCTTAATCGCGATGGGCTTCAAGGCTTTCAGGAATTCATTGTGGAAGTTCTCATGTTGAGCCTGTTCCATCATCCCAATCTTGTAACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGAAGTTTGGAAGATCATCTTTTTGTTTTGGGTACTGACAAACAGCCGCTGAGTTGGAATACAAGGATCAAGATTGCAGCTTCTGCTGCCCGAGGCCTCGAGTATCTCCACTGTAAAGCAAATCCCCCAGTCATATACCGTGACTTGAAATCAGCTAATATCTTATTGGACAATGACTTTAATCCTAAGCTTTCAGATTTTGGGCTAGCTAAACTGGGACCTGTTGGTGACAATACTCATGTTTCAACCAGAGTAATGGGAACATATGGATATTGCGCTCCAGAGTACGCCATGAGTGGCAAATTAACCCTTAAATCTGATATTTACAGCTTTGGTGTGGTTATGCTTGAGCTTATTACGGGGCGTAAGGTAATTGATACTACAAGGAAACCAGGGGAGCAGAACCTAATTGCTTGGTCCCGTCCTTTACTTAAGGACCGCAGAAAGTTTGTGCAATTAGTTGATCCCCTGTTGGAAGGACACTTCCCTTTTCGTTGTTTGCAACACGCAGTTGCAATTACTGCAATGTGTCTCCAGGAACAACCTTCGTTTCGCCCTCTTATTAGCGATATTGTTGTAGCACTCGACTATTTGTCCACTCAGAGTTATTTACAAGAACTACGCAATGTTAGAATTCACAGTTCATCACAATCACCACTTTCACAAAAGAGTGGAGACACCAATGCCAAGGAATCAAATCCCTGA | 1164 | 44.16 | MGCFSCITPRTQDGSRVEIDDHGVRFDSRYIVNSSGTWRGKEARMSSESCPKGKGSVAAARSFTFRELATATKGFKGVNLLGEGGFGRVYKGRLETGQIVAVKQLNRDGLQGFQEFIVEVLMLSLFHHPNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFVLGTDKQPLSWNTRIKIAASAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVMLELITGRKVIDTTRKPGEQNLIAWSRPLLKDRRKFVQLVDPLLEGHFPFRCLQHAVAITAMCLQEQPSFRPLISDIVVALDYLSTQSYLQELRNVRIHSSSQSPLSQKSGDTNAKESNP | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 18894900 | 18897938 | - | Hsped.08g15080.1 | Hepe08g1508 | 577480 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1508 | 387 | FunFam | Serine/threonine-protein kinase PBS1 | 151 | 366 | - | - | |
Hepe08g1508 | 387 | PANTHER | OS07G0668900 PROTEIN | 49 | 374 | - | - | |
Hepe08g1508 | 387 | ProSiteProfiles | Protein kinase domain profile. | 75 | 351 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g1508 | 387 | MobiDBLite | consensus disorder prediction | 368 | 387 | - | - | |
Hepe08g1508 | 387 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 349 | IPR011009 | - | |
Hepe08g1508 | 387 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 150 | - | - | |
Hepe08g1508 | 387 | CDD | STKc_IRAK | 81 | 345 | - | - | |
Hepe08g1508 | 387 | SMART | serkin_6 | 75 | 351 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g1508 | 387 | FunFam | probable serine/threonine-protein kinase RLCKVII | 47 | 150 | - | - | |
Hepe08g1508 | 387 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 197 | 209 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe08g1508 | 387 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 103 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g1508 | 387 | Pfam | Protein kinase domain | 78 | 344 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g1508 | 387 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 370 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0239 | Hepe-Chr1:36446333 | Hepe08g1508 | Hepe-Chr8:18894900 | 2.63e-27 | dispersed | |
Hepe01g2343 | Hepe-Chr1:87975029 | Hepe08g1508 | Hepe-Chr8:18894900 | 2.91e-196 | dispersed | |
Hepe05g0772 | Hepe-Chr5:17810173 | Hepe08g1508 | Hepe-Chr8:18894900 | 4.30e-39 | dispersed | |
Hepe08g0759 | Hepe-Chr8:6819655 | Hepe08g1508 | Hepe-Chr8:18894900 | 1.19e-48 | dispersed | |
Hepe08g1508 | Hepe-Chr8:18894900 | Hepe10g1128 | Hepe-Chr10:44681528 | 1.36e-143 | dispersed | |
Hepe08g1507 | Hepe-Chr8:18875861 | Hepe08g1508 | Hepe-Chr8:18894900 | 2.98e-92 | tandem | |
Hepe02g2404 | Hepe-Chr2:69679854 | Hepe08g1508 | Hepe-Chr8:18894900 | 3.86e-67 | wgd | |
Hepe07g1396 | Hepe-Chr7:46037783 | Hepe08g1508 | Hepe-Chr8:18894900 | 1.11e-70 | wgd | |
Hepe08g1508 | Hepe-Chr8:18894900 | Hepe09g1350 | Hepe-Chr9:21021532 | 6.74e-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73072 | PF00069 | Pkinase | 1.40E-47 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1508 | - | - | - | 0.0 |