Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1508 ATGGGTTGCTTTTCTTGTATTACTCCTCGTACTCAAGATGGGAGCAGGGTCGAAATTGATGATCATGGTGTTCGATTTGATTCCCGGTATATTGTTAATTCCTCAGGTACATGGAGGGGGAAAGAAGCTCGAATGAGCAGTGAAAGCTGTCCGAAGGGGAAGGGGAGCGTCGCCGCCGCTCGTAGTTTTACGTTCCGTGAACTTGCCACAGCCACAAAAGGTTTCAAGGGAGTGAATTTGCTTGGAGAGGGTGGTTTTGGACGAGTCTACAAAGGACGTTTGGAAACAGGACAGATTGTTGCAGTTAAACAGCTTAATCGCGATGGGCTTCAAGGCTTTCAGGAATTCATTGTGGAAGTTCTCATGTTGAGCCTGTTCCATCATCCCAATCTTGTAACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGAAGTTTGGAAGATCATCTTTTTGTTTTGGGTACTGACAAACAGCCGCTGAGTTGGAATACAAGGATCAAGATTGCAGCTTCTGCTGCCCGAGGCCTCGAGTATCTCCACTGTAAAGCAAATCCCCCAGTCATATACCGTGACTTGAAATCAGCTAATATCTTATTGGACAATGACTTTAATCCTAAGCTTTCAGATTTTGGGCTAGCTAAACTGGGACCTGTTGGTGACAATACTCATGTTTCAACCAGAGTAATGGGAACATATGGATATTGCGCTCCAGAGTACGCCATGAGTGGCAAATTAACCCTTAAATCTGATATTTACAGCTTTGGTGTGGTTATGCTTGAGCTTATTACGGGGCGTAAGGTAATTGATACTACAAGGAAACCAGGGGAGCAGAACCTAATTGCTTGGTCCCGTCCTTTACTTAAGGACCGCAGAAAGTTTGTGCAATTAGTTGATCCCCTGTTGGAAGGACACTTCCCTTTTCGTTGTTTGCAACACGCAGTTGCAATTACTGCAATGTGTCTCCAGGAACAACCTTCGTTTCGCCCTCTTATTAGCGATATTGTTGTAGCACTCGACTATTTGTCCACTCAGAGTTATTTACAAGAACTACGCAATGTTAGAATTCACAGTTCATCACAATCACCACTTTCACAAAAGAGTGGAGACACCAATGCCAAGGAATCAAATCCCTGA 1164 44.16 MGCFSCITPRTQDGSRVEIDDHGVRFDSRYIVNSSGTWRGKEARMSSESCPKGKGSVAAARSFTFRELATATKGFKGVNLLGEGGFGRVYKGRLETGQIVAVKQLNRDGLQGFQEFIVEVLMLSLFHHPNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFVLGTDKQPLSWNTRIKIAASAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVMLELITGRKVIDTTRKPGEQNLIAWSRPLLKDRRKFVQLVDPLLEGHFPFRCLQHAVAITAMCLQEQPSFRPLISDIVVALDYLSTQSYLQELRNVRIHSSSQSPLSQKSGDTNAKESNP 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18894900 18897938 - Hsped.08g15080.1 Hepe08g1508 577480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1508 387 FunFam Serine/threonine-protein kinase PBS1 151 366 - -
Hepe08g1508 387 PANTHER OS07G0668900 PROTEIN 49 374 - -
Hepe08g1508 387 ProSiteProfiles Protein kinase domain profile. 75 351 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1508 387 MobiDBLite consensus disorder prediction 368 387 - -
Hepe08g1508 387 SUPERFAMILY Protein kinase-like (PK-like) 60 349 IPR011009 -
Hepe08g1508 387 Gene3D Phosphorylase Kinase; domain 1 46 150 - -
Hepe08g1508 387 CDD STKc_IRAK 81 345 - -
Hepe08g1508 387 SMART serkin_6 75 351 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1508 387 FunFam probable serine/threonine-protein kinase RLCKVII 47 150 - -
Hepe08g1508 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g1508 387 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524(InterPro)
Hepe08g1508 387 Pfam Protein kinase domain 78 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g1508 387 Gene3D Transferase(Phosphotransferase) domain 1 151 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0239 Hepe-Chr1:36446333 Hepe08g1508 Hepe-Chr8:18894900 2.63e-27 dispersed
Hepe01g2343 Hepe-Chr1:87975029 Hepe08g1508 Hepe-Chr8:18894900 2.91e-196 dispersed
Hepe05g0772 Hepe-Chr5:17810173 Hepe08g1508 Hepe-Chr8:18894900 4.30e-39 dispersed
Hepe08g0759 Hepe-Chr8:6819655 Hepe08g1508 Hepe-Chr8:18894900 1.19e-48 dispersed
Hepe08g1508 Hepe-Chr8:18894900 Hepe10g1128 Hepe-Chr10:44681528 1.36e-143 dispersed
Hepe08g1507 Hepe-Chr8:18875861 Hepe08g1508 Hepe-Chr8:18894900 2.98e-92 tandem
Hepe02g2404 Hepe-Chr2:69679854 Hepe08g1508 Hepe-Chr8:18894900 3.86e-67 wgd
Hepe07g1396 Hepe-Chr7:46037783 Hepe08g1508 Hepe-Chr8:18894900 1.11e-70 wgd
Hepe08g1508 Hepe-Chr8:18894900 Hepe09g1350 Hepe-Chr9:21021532 6.74e-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73072 PF00069 Pkinase 1.40E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1508 - - - 0.0