Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1516 ATGGGGGGAGGTGGCGGTGGCGGTGCACAAAGTAGGGAGTTAGATCAAACTCCAACATGGGCCGTTGCCGCTGTTTGTGCAGTCATCATTCTTATTTCGATCATATTGGAAAAAGTTCTTCACAGGGTTGGGGAGATTTTTCAAAGAAAGAAAAAGAAAGCACTGTATGAAGCGCTCGAGAAAGTTAAAGGCGAGCTTATGGTTTTAGGATTCATTTCTTTGCTTTTGACATTCGGACAAAATTACATTGCTCAAGTTTGCATACCCTCAAGGTACGCAAATACAATGTTGCCTTGCCCTTATAGAGGGAATAGTCATTTACCCAAAAGCTCCCATGGCATCGAGCCCGAAGAGGAAGAAGAGCACGCAGAGCACCACCGCAGGCTTCTTTGGTATGAGCATCGACGTCTTGGGGGCGGTGGTGCTCTAGTAAGCTGCAAACCAGGGTTTATGCAACTTATATCTCTAAATGGTTTGCATCAAATACATATCTTCATCTTCTTTCTAGCAGTCCTCCATGTTGTATTTAGTGGCGTTACAATGACTCTCGGAAGATTGAAAATTCGTGCGTGGAAGGTATGGGAAAAACAGACTGAAGTAGAACATGATGCCATGAACGATCCTACAAGATTCAGACTTACTCATGAGACGTCTTTTGTAAGAGATCACAGCAGTTTCTGGACCAAAACGCCCCTCTCCTTTTACTTTGTATGCTTCATGAGACAATTCTTCAGGTCGGTTAGTAGGGCTGATTACTTGTCGCTTAGACATGGTTTTGTCACCGTTCATTTAGCACCTGGGAGTAAATTTGACTTTCAAAAGTACATCAAAAGGTCATTAGAAGATGACTTCAAGGTGGTTGTCGGAATCAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTGCTTCTCAATGTTAGTGGGTGGCAAGTTATGCTTTGGTTGTCCATATTTCCTCTAGTGGTGATCTTAGCGGTTGGAACGAAGCTGCAAGGAATTATAACGCAAATGGCGCTTGAAATAAAGGAAAGGCATGCGGTGGTTCAAGGGATTCCTCTCGTCCAAGTCTCCGACAGACATTTCTGGTTCAGTTGGCCTATTTTGGTTCTTTATCTCATCCATTATGTCCTCTTCCAGAATGCATTTGAGATTACATATTTCTTTTGGATATGGTATGAATTTGGGTTGAGATCATGCTTTCACGAAAATTTTGATCTCATTATCGTCAGAGTTGCTCTTGGGGTTGGAGTCCAGATTCTGTGCAGCTACATTACACTCCCATTATATGCTCTTGTCACTCAGATGGGATCGACGATGAAGAAATCCATATTCGACGATCAAACTTCAAAAGCATTGAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGACAGAAGGGGGAAAGCCTGAGCCAATGCCGATGCGAACTTTAGGCGCCGTTGGCGGCGGAGGAAGCCCTCCCGATTCACCGTCGCACTCGGGGCATCAACCGTTGCCCAACGACGTCGAAGCTTCTGCCGTTCCTCCTGGCAACAGTATGTCGACCATCGATCTCCAGCAACAACAGCAGCTAAATTACGCCGATCGTGACTTGTTGAGCTGA 1602 44.69 MGGGGGGGAQSRELDQTPTWAVAAVCAVIILISIILEKVLHRVGEIFQRKKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAQVCIPSRYANTMLPCPYRGNSHLPKSSHGIEPEEEEEHAEHHRRLLWYEHRRLGGGGALVSCKPGFMQLISLNGLHQIHIFIFFLAVLHVVFSGVTMTLGRLKIRAWKVWEKQTEVEHDAMNDPTRFRLTHETSFVRDHSSFWTKTPLSFYFVCFMRQFFRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVSGWQVMLWLSIFPLVVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPILVLYLIHYVLFQNAFEITYFFWIWYEFGLRSCFHENFDLIIVRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDDQTSKALKQWHRSALKKKTEGGKPEPMPMRTLGAVGGGGSPPDSPSHSGHQPLPNDVEASAVPPGNSMSTIDLQQQQQLNYADRDLLS 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19137027 19143936 + Hsped.08g15160.1 Hepe08g1516 577488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1516 533 PANTHER MLO-LIKE PROTEIN 1 5 473 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Hepe08g1516 533 Pfam Mlo family 12 466 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Hepe08g1516 533 MobiDBLite consensus disorder prediction 507 533 - -
Hepe08g1516 533 MobiDBLite consensus disorder prediction 460 533 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1676 Hepe-Chr4:71959229 Hepe08g1516 Hepe-Chr8:19137027 4.02e-208 dispersed
Hepe06g0856 Hepe-Chr6:55470518 Hepe08g1516 Hepe-Chr8:19137027 3.81e-187 dispersed
Hepe08g1516 Hepe-Chr8:19137027 Hepe10g1105 Hepe-Chr10:43714798 3.25e-156 dispersed
Hepe07g0512 Hepe-Chr7:5410406 Hepe08g1516 Hepe-Chr8:19137027 1.75e-90 transposed
Hepe01g0336 Hepe-Chr1:51198964 Hepe08g1516 Hepe-Chr8:19137027 1.97e-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1516 K08472 - csv:101208890 895.96