Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1558 | ATGGATCCACCCACTCTGATGAACGAAGGGTCATTTCCAAATAACGCTAATGCCAATGTCAATGCCAATGTCTCTCCCTACAATCTCTCAGAGATCTGGCACTTCCCAATTAATGGCGGAACCTCCCTTGATGAATCTGGTGGTGGACTCGCCTTGAGGATGGCTCAGTTCGCTCATGATTTGGGGCAGTTTGGAGAGATTGCCTTGGCGAATCGAGAAGTAGTACCACCTCATCCTCATGCCCATGGTGCTAATTCCAAGAAGCGGCGTGATGCAGAGCAAGATTCAGCTGCCAAGGTCAGTTCCACCGGCAATGGCGGCAACAATGCCAATAGCGGCGCCACGAATGACTCTGGTGGAAAACGCCTTAAAACAGCTGCGTGTAGAGATGATAATCACGAATCCAAAACAGAAGCAGAAGCCAGATCTGGCAAGGCCGAGCAGAACTCCCAGCCCCCACCAGAACAACCCAAACTGGATTACATTCATGTGCGAGCAAGAAGGGGCCAAGCAACTGATAGCCATAGTTTGGCTGAAAGGGCTAGAAGAGAAAAGATAAGTGAGAGAATGAAAACTCTACAGGATTTGGTCCCTGGGTGTAATAAGGTCATTGGAAAAGCACTTGTACTTGATGAGATAATAAATTACATTCAATCGCTTCAGCGTCAGGTTGAGTTCTTGTCAATGAAGCTTGAAGCAGTTAATACGAGAGCTAGTCCTGGCATCGAAGTGTTTCCTCCTAAAGATTATGGTCAACAGGCATTCGATACAACTGGTGTTGCGTTTGGTTCACAAGCAACAAGAGAATACAGCCGTGGCTCATCACCAGAATGGCTGCATATGCAGATCGGTGGCGGTTTCGAAAGAACGACGTAG | 876 | 47.83 | MDPPTLMNEGSFPNNANANVNANVSPYNLSEIWHFPINGGTSLDESGGGLALRMAQFAHDLGQFGEIALANREVVPPHPHAHGANSKKRRDAEQDSAAKVSSTGNGGNNANSGATNDSGGKRLKTAACRDDNHESKTEAEARSGKAEQNSQPPPEQPKLDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRASPGIEVFPPKDYGQQAFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21104652 | 21107167 | + | Hsped.08g15580.1 | Hepe08g1558 | 577530 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1558 | 291 | SMART | finulus | 176 | 226 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g1558 | 291 | FunFam | Basic helix-loop-helix transcription factor | 167 | 239 | - | - | |
Hepe08g1558 | 291 | Coils | Coil | 217 | 237 | - | - | |
Hepe08g1558 | 291 | CDD | bHLH_AtBPE_like | 160 | 245 | - | - | |
Hepe08g1558 | 291 | MobiDBLite | consensus disorder prediction | 76 | 157 | - | - | |
Hepe08g1558 | 291 | Pfam | Helix-loop-helix DNA-binding domain | 174 | 221 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g1558 | 291 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 168 | 236 | IPR036638 | GO:0046983(InterPro) | |
Hepe08g1558 | 291 | MobiDBLite | consensus disorder prediction | 123 | 143 | - | - | |
Hepe08g1558 | 291 | Gene3D | - | 167 | 240 | IPR036638 | GO:0046983(InterPro) | |
Hepe08g1558 | 291 | MobiDBLite | consensus disorder prediction | 97 | 119 | - | - | |
Hepe08g1558 | 291 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 170 | 220 | IPR011598 | GO:0046983(InterPro) | |
Hepe08g1558 | 291 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 86 | 245 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g1558 | Hepe-Chr8:21104652 | Hepe10g1832 | Hepe-Chr10:55051312 | 1.35e-37 | dispersed | |
Hepe09g0154 | Hepe-Chr9:1222942 | Hepe08g1558 | Hepe-Chr8:21104652 | 1.06e-79 | transposed | |
Hepe05g1121 | Hepe-Chr5:55294306 | Hepe08g1558 | Hepe-Chr8:21104652 | 6.72e-23 | wgd | |
Hepe05g0900 | Hepe-Chr5:34467782 | Hepe08g1558 | Hepe-Chr8:21104652 | 1.27e-13 | wgd | |
Hepe08g1558 | Hepe-Chr8:21104652 | Hepe09g1288 | Hepe-Chr9:17812091 | 6.53e-13 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56232 | PF00010 | HLH | 1.20E-08 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1558 | - | - | - | 0.0 |