Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe08g1598 | ATGGAGGCTCTGTTCGGGTATGTAGCAACAAACAAGAAATCCCCACCAAAGCAGTGTGCCAAACATAAGCAAACTACAAAATCAACAGGCCCCAACAATGGCAGAAAAGCACAAATCTCCATCCTCGATTCAAGAACGTCGAGAAACATTGCAATAATCCTTAAATCCCTGAATATATCTCGGCAAGAGCTTCACGATGCTCTGATGGAGGGACAGGGCCTCGATTCAGACACACTCGAGAAGCTTGTCAAGATCACTCCAAATCAAGAACAAGAATCCCAGTTCCTCGAATTCGATGGCGACCCATTAAAGCTTGGCGATGCAGAATCTTTCATTTTCCACCTTCTGAAGGCTGTTCCAACAGCCTTCACTCGTCTAAACGCCATGCTTTTCAGATCAAACTTCAATTCAGAGATAATTCGTCTCAAGGACTTTTCACAAACACTTGGGGTGTGTTGCGAAGAGCTAAAGAGAAAAGGGGTATTCACAAAACTGCTAGAAGCAACTCTCAGAGCTGGAAACCGATTGAATTCAGGAGATACACAAGCATTCAATCTCAATTCACTCTCAGATGTTAAAAGCACAGGCGGAAAAACCACATTGCTCGACTTCGTGGTCGAAGAAGTAATGAGATCCGAAGGGAAAAGGCGAATCTCAAACATAAATTCAAAGGAAAGAGAAATCGAATACACAAAGCTTGGATTAACAGCGGTAGAATCACTAACCTCAGAGCTCCCCAATGTGAAGAAAGCATCCACAATCGACTACGAAGCGTTCATGGCGACTTGCCCAAAGATGAGGATGCAGATTTCAGAGATCCGAAAGCATCTGCGGAAGGAAGGAGGTGAATACAAGAGGAAGATGATGGAATTTATCAAATTCGCAGAGGAAGAAGTCGAAAGGGGGAGTAGAGAGCAAAAAAAGGCGTTGGAGGTTGTGAAGAAGACGAATGAATGGTATGAAACAGGGGGTAGAGAAAATCCATTAATCAGGCGTGTAGTGAAATAG | 1008 | 43.75 | MEALFGYVATNKKSPPKQCAKHKQTTKSTGPNNGRKAQISILDSRTSRNIAIILKSLNISRQELHDALMEGQGLDSDTLEKLVKITPNQEQESQFLEFDGDPLKLGDAESFIFHLLKAVPTAFTRLNAMLFRSNFNSEIIRLKDFSQTLGVCCEELKRKGVFTKLLEATLRAGNRLNSGDTQAFNLNSLSDVKSTGGKTTLLDFVVEEVMRSEGKRRISNINSKEREIEYTKLGLTAVESLTSELPNVKKASTIDYEAFMATCPKMRMQISEIRKHLRKEGGEYKRKMMEFIKFAEEEVERGSREQKKALEVVKKTNEWYETGGRENPLIRRVVK | 335 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 23025454 | 23026461 | - | Hsped.08g15980.1 | Hepe08g1598 | 577570 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe08g1598 | 335 | MobiDBLite | consensus disorder prediction | 21 | 36 | - | - | |
| Hepe08g1598 | 335 | SMART | it6_source | 1 | 332 | IPR015425 | - | |
| Hepe08g1598 | 335 | PANTHER | FORMIN-RELATED | 1 | 322 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
| Hepe08g1598 | 335 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Hepe08g1598 | 335 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1 | 335 | IPR015425 | - | |
| Hepe08g1598 | 335 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 38 | 322 | - | - | |
| Hepe08g1598 | 335 | Gene3D | Formin, FH2 domain | 1 | 329 | IPR042201 | - | |
| Hepe08g1598 | 335 | Pfam | Formin Homology 2 Domain | 11 | 323 | IPR015425 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe08g1598 | Hepe-Chr8:23025454 | Hepe10g1681 | Hepe-Chr10:53531709 | 1.28e-78 | dispersed | |
| Hepe08g1598 | Hepe-Chr8:23025454 | Hepe09g1587 | Hepe-Chr9:43697963 | 2.87e-47 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe08g1598 | K28090 | - | csv:101217450 | 489.189 |