Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1610 | ATGTCGATCTCTTCTTCTTCCGACTGCTTCATTGACTCTCACTTACTCTGTGACGAGGATTCCTCCGGTATTTTGTCTGGAGACTCGCCGGATTACTCCTCCGACTTTGAATCACCCGCCAGTACCGAGGATTCTATCGCCAGTTTCATAGAGGACGAGAGGCACTTCGTTCCTGGGATTGATTACTTGTCGCGCTTTCTCTCTCACTCGCTGGATTCTTCCGCTAGAGCTGACTCTGTTGCATGGATTCTCAAGGTTCAAGCATATTACGGTTTTCAACCGCTCACTGCGTACCTCTCCGTCAATTACTTGGATCGATTCCTTTATTCTCGCCGCTTGCCGGAAACAAATGGGTGGCCATTGCAGCTGCTTTCAGTGGCTTGTTTGTCACTTGCAGCTAAAATGGAGGAACCCCTTGTTCCTTCTTTCATGGATCTCCAGATTGAAGGAGCAAAATATATATTTGAACCTAGAACAATACGGAGGATGGAGCTTCTTGTCTTGACAACTTTGAATTGGCGGCTACGTTCTGTAACACCCTTCAGCTTTATCGGATTCTTCGCTTACAAAGTTGATCCCACCGGAACATTTTCCAGTTTTCTCAACTCACGCTGCACAGAAATTATTCTCTCCAATATTCGAGACGCTAGCTTTCTTGAGTACTGGCCTTCGTGCATTGCTGCCGCAGCCTTACTTTGTGCGGCAAATGAAATACCCAATTTGACCCTCTTGAATCCTGAACATGCCGAGTCTTGGTGCAATGGACTCAGCAAAGAGAAAATTCTCGGATGTTATCGGTTAATGCAGCCGTCAACGGCAAAGAGTCGTCGATGGAAGCCCCCGAAAGTGATACCGCAGGTCCGAGTCCGGATCCGAGCTGGGTTGAGGTACAGTGACTCATCCTCCTCCTCCTCATCATCAAGGTTACCTTTTAAAAGGAGAAAGTTGAATAATTGTGTGTGGGTAGAAGATGACAAAGAAAATTCCAAGTTAAGAGCAGACGAATAA | 1008 | 46.63 | MSISSSSDCFIDSHLLCDEDSSGILSGDSPDYSSDFESPASTEDSIASFIEDERHFVPGIDYLSRFLSHSLDSSARADSVAWILKVQAYYGFQPLTAYLSVNYLDRFLYSRRLPETNGWPLQLLSVACLSLAAKMEEPLVPSFMDLQIEGAKYIFEPRTIRRMELLVLTTLNWRLRSVTPFSFIGFFAYKVDPTGTFSSFLNSRCTEIILSNIRDASFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAESWCNGLSKEKILGCYRLMQPSTAKSRRWKPPKVIPQVRVRIRAGLRYSDSSSSSSSSRLPFKRRKLNNCVWVEDDKENSKLRADE | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23522607 | 23525964 | - | Hsped.08g16100.1 | Hepe08g1610 | 577582 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1610 | 335 | SUPERFAMILY | Cyclin-like | 160 | 283 | IPR036915 | - | |
Hepe08g1610 | 335 | CDD | CYCLIN_AtCycD-like_rpt2 | 178 | 268 | - | - | |
Hepe08g1610 | 335 | FunFam | D2/4-type cyclin | 59 | 176 | - | - | |
Hepe08g1610 | 335 | SUPERFAMILY | Cyclin-like | 39 | 175 | IPR036915 | - | |
Hepe08g1610 | 335 | CDD | CYCLIN_AtCycD-like_rpt1 | 75 | 173 | - | - | |
Hepe08g1610 | 335 | ProSitePatterns | Cyclins signature. | 76 | 107 | IPR048258 | - | |
Hepe08g1610 | 335 | Pfam | Cyclin, N-terminal domain | 45 | 176 | IPR006671 | - | |
Hepe08g1610 | 335 | SMART | Cyclin_C_2 | 178 | 287 | IPR004367 | - | |
Hepe08g1610 | 335 | Gene3D | - | 48 | 239 | - | - | |
Hepe08g1610 | 335 | Gene3D | - | 59 | 176 | - | - | |
Hepe08g1610 | 335 | Pfam | Cyclin, C-terminal domain | 178 | 276 | IPR004367 | - | |
Hepe08g1610 | 335 | SMART | cyclin_7 | 81 | 169 | IPR013763 | - | |
Hepe08g1610 | 335 | PANTHER | CYCLINS | 38 | 270 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1828 | Hepe-Chr1:83220483 | Hepe08g1610 | Hepe-Chr8:23522607 | 1.09e-40 | dispersed | |
Hepe04g0837 | Hepe-Chr4:62625013 | Hepe08g1610 | Hepe-Chr8:23522607 | 1.29e-24 | dispersed | |
Hepe08g1610 | Hepe-Chr8:23522607 | Hepe10g1669 | Hepe-Chr10:53378694 | 1.00e-146 | dispersed | |
Hepe08g1610 | Hepe-Chr8:23522607 | Hepe10g0446 | Hepe-Chr10:5063334 | 1.16e-52 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1610 | K18810 | - | csv:101210686 | 607.446 |