Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1720 ATGGAGCATGGAACAGTGGTGTCGTCCAAGGGCAAGGTGGATACAAATCCTTCAAGTAAATCCTACAAAAAAGTAATAATAGTTGCAGCAATTGCAGCCGGAGTCCAATTTGGTTGGGCTCTCCAGCTTTCATTGTTGACACCTTACGTACAACAACTTGGGGTTCCACATACATGGTCAGCTTTCATATGGCTTTGTGGTCCAATGTCCGGGTTGATTGTGCAGCCGACGGTTGGGTACTATAGCGATCGTTGCACCTCTAGGTTTGGTCGTCGTCGACCCTTCATCGTAGCCGGGGCTGTGTTCGTGGCGGTTGCGGTTTTCCTCATTGGGTTCGCTGCAGACATTGGGCATATAGCGGGAGATGAGCTTTCGAAAGCCACAAAACCAAGGGCGGTGGCGATATTTGTGGTTGGATTTTGGGTCCTCGATGTGGCTAACAATATGTTGCAAGGGCCTTGTAGAGCTCTGTTGGCAGACATGTCATGTAAGAACCACAAAAAGATGAAAATGGCGAATGGATTATTCTCCTTCTTTATGGGTGTAGGGAATGTTTTAGGGTATGCTGCCGGGGCCAATAACAAACTCTATAAAGTCCTTCCCTTCACAGTCACTAAAGCATGTGACCTTTACTGCGCTAACCTAAAAACATGCTTCTTAATCGACATCGTGTTCCTCGTAACGATTACGACGTTCGCGATGGTAATGGTGAGTGAGAAGCCATTCGAGCGGATGGATATGGAGGAAGAAAACTCGACACCCTTTTTCGGGGAGTTGTTTGGAGCGCTGAAGAAGTTGTCAAAGCCGATGTGGATCTTGCTACTTGTAACAGCTTTAAATTGGATTGGTTGGTTCCCATTTATAATGTACGACACTGACTGGATGGGTAGGGAAGTGTATGGTGGTAAGCCAACTGGGAGTCCAGAAGAAGTGAAGTTCTATGACCATGGTGTTCGTGCCGGAGCCCTTGGTTTGATGATAAACTCCTTTATTCTTGGCTTTTCTGCATTGGGAATAGAGCCACTTAGTCGTGTTATAGGAGGGCTCAGGTGGGTTTGGGGATACGTCAACATTATAATTACAATTTGTATGGGATCTATGGTCGTTGTTACAAAGGTTGCTGAGCATTGGAGGGACGTTAATGGCTTGGCACCTCCTCCCCCTAATGTCAAGGCTGGAGCCTTTACCATCTTTGCAATCTTGGGTATTCCACTCTCAGTTAATTATAGTGTTCCCTTTGCCCTAGCATCCATCTTTTCTTCAACCTCCAATGCCGGTCAAGGGCTCTCTTTGGGAATTCTCAACCTCTTCATAGTTTTGCCACAATTTTTTGTGTCGGCCGTTAGTGGGCCGTTAGATGCAGCCTTTGGAGGAGGAAATTTACCCGCATTTGTAATGGGTGGAATCGCGGCTTTTGCCAGCTCAATGTGCGCCATGTTCGTACTCCCCGACCCACCGCCTCAATCCGACGTCGTCTTAACAATGGGTGGTGGCCATTGA 1500 47.27 MEHGTVVSSKGKVDTNPSSKSYKKVIIVAAIAAGVQFGWALQLSLLTPYVQQLGVPHTWSAFIWLCGPMSGLIVQPTVGYYSDRCTSRFGRRRPFIVAGAVFVAVAVFLIGFAADIGHIAGDELSKATKPRAVAIFVVGFWVLDVANNMLQGPCRALLADMSCKNHKKMKMANGLFSFFMGVGNVLGYAAGANNKLYKVLPFTVTKACDLYCANLKTCFLIDIVFLVTITTFAMVMVSEKPFERMDMEEENSTPFFGELFGALKKLSKPMWILLLVTALNWIGWFPFIMYDTDWMGREVYGGKPTGSPEEVKFYDHGVRAGALGLMINSFILGFSALGIEPLSRVIGGLRWVWGYVNIIITICMGSMVVVTKVAEHWRDVNGLAPPPPNVKAGAFTIFAILGIPLSVNYSVPFALASIFSSTSNAGQGLSLGILNLFIVLPQFFVSAVSGPLDAAFGGGNLPAFVMGGIAAFASSMCAMFVLPDPPPQSDVVLTMGGGH 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30233147 30235310 - Hsped.08g17200.1 Hepe08g1720 577692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1720 499 Gene3D MFS general substrate transporter like domains 18 482 IPR036259 -
Hepe08g1720 499 PANTHER SUGAR TRANSPORTER 17 481 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Hepe08g1720 499 SUPERFAMILY MFS general substrate transporter 23 487 IPR036259 -
Hepe08g1720 499 FunFam Sucrose transporter SUC2 23 244 - -
Hepe08g1720 499 CDD MFS_SLC45_SUC 26 480 - -
Hepe08g1720 499 NCBIfam sucrose/proton symporter 22 486 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Hepe08g1720 499 Pfam MFS/sugar transport protein 32 283 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1685 Hepe-Chr8:26899017 Hepe08g1720 Hepe-Chr8:30233147 8.07e-142 dispersed
Hepe08g1720 Hepe-Chr8:30233147 Hepe10g0399 Hepe-Chr10:4392310 7.02e-170 dispersed
Hepe08g1720 Hepe-Chr8:30233147 Hepe08g1860 Hepe-Chr8:47198077 9.42e-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1720 K15378 - csv:116401998 835.484