Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1761 ATGGGGTCCTGCTTGTCTGCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCAACCTCTCCTTCTAAGCACCATCGAACCAAGTATGGTTCCAAGAGGCGAAATTCTTCTCGGAATTCCTCCTTTGGGGATCTCCATCGGATCTCCGGCAGGCTCTTCTCCAATGGCTTCACTGATCTTTCTTCTCTCTTCACGCAGCAGGGCAAGAAAGGGACCAATCAGGATGCTATGATTGTTTGGGAGAATTTTGGCTCTAGAACTGATACGATCTTCTGTGGGGTCTTCGATGGCCACGGCCCATATGGTCATATGGTTGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTCAACTTGACCACCGATGATGTTCTTAGAGAGATCAGCCTTAATACAGGAAGTATGAACGCGGATGAGGCTACCTCCTTTTTATCTGCCGATGAAGAGTATAGGGCCTCCATTGATGTTGATGGAACAGAAAAGCAACCTGAAATTTTCCATACTTTGAAGGAGTCATTTCTTAAGGCCTATAGAGTTATGGATAGGGAACTCAGAATGCACCAAACTATAGATAGCTACTGTAGTGGGACTACGGCAGTGACTATAGTTAAACAGGGTCAGGATCTTGTCATTGGAAACGTTGGGGACTCCAGAGCTGTTTTGGGTACGAGAGATAAAGATGACTCTCTTGTTGCAATTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAGTGTAAAGGTCGTGTCTTTGCTCTCCAAGACGAACCGGATGTTTGTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCGCGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATTTCTGTACCTGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTGCTGTCAAACAAAGAGGTCGTAGATATTGTTGCATCAGCTCCAAAACGTAGTACTGCAGCTCGAACTCTGGTGGAGATAGCCATTAAAGCATGGAAATATAAATACCCAACTTCCAAGATCGATGACTGTGCAGTCATTTGCCTCTTCCTCGACTCAAACTCCAGCAATCTATCATCTGCTTCCAATACCAAACCAGAAGAGCAACAAAGTTTAACAGCAGATCAACTCAGCACTGCAGTTGAGAATGAAGATCTCTCTGGGCCAAATGGTCTGAATCGTTCGGGAACCGTCCGAACGAGCAAAGAAATCTTGCAGGATGGAAGCGAAGAAGAAGAAGAAGAAGAAGATGAATCGAAGGAGGAACTGTCAGAAATTGGAATAGAATGGTCTGCCCTGGAAGGAGTCTCGCGCGTAAACACTTTGGTAAACCTGCCAAGATTTGATCCTGGAAAAGATGATAAGAAAGGCCGTAAGTAA 1461 45.72 MGSCLSAESRSPIPGSPTSPSKHHRTKYGSKRRNSSRNSSFGDLHRISGRLFSNGFTDLSSLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVLREISLNTGSMNADEATSFLSADEEYRASIDVDGTEKQPEIFHTLKESFLKAYRVMDRELRMHQTIDSYCSGTTAVTIVKQGQDLVIGNVGDSRAVLGTRDKDDSLVAIQLTVDLKPNLPAEAERIRKCKGRVFALQDEPDVCRVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRSTAARTLVEIAIKAWKYKYPTSKIDDCAVICLFLDSNSSNLSSASNTKPEEQQSLTADQLSTAVENEDLSGPNGLNRSGTVRTSKEILQDGSEEEEEEEDESKEELSEIGIEWSALEGVSRVNTLVNLPRFDPGKDDKKGRK 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34251428 34255152 - Hsped.08g17610.1 Hepe08g1761 577733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1761 486 Gene3D - 59 380 IPR036457 -
Hepe08g1761 486 ProSiteProfiles PPM-type phosphatase domain profile. 59 378 IPR001932 -
Hepe08g1761 486 MobiDBLite consensus disorder prediction 407 430 - -
Hepe08g1761 486 SMART PP2C_4 47 376 IPR001932 -
Hepe08g1761 486 MobiDBLite consensus disorder prediction 407 452 - -
Hepe08g1761 486 FunFam probable protein phosphatase 2C 33 54 381 - -
Hepe08g1761 486 MobiDBLite consensus disorder prediction 1 42 - -
Hepe08g1761 486 Coils Coil 429 456 - -
Hepe08g1761 486 Pfam Protein phosphatase 2C 173 357 IPR001932 -
Hepe08g1761 486 SUPERFAMILY PP2C-like 59 379 IPR036457 -
Hepe08g1761 486 CDD PP2Cc 60 378 IPR001932 -
Hepe08g1761 486 MobiDBLite consensus disorder prediction 434 450 - -
Hepe08g1761 486 MobiDBLite consensus disorder prediction 1 23 - -
Hepe08g1761 486 PANTHER PROTEIN PHOSPHATASE 43 377 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1867 Hepe-Chr1:83600673 Hepe08g1761 Hepe-Chr8:34251428 8.22e-92 dispersed
Hepe03g0077 Hepe-Chr3:903844 Hepe08g1761 Hepe-Chr8:34251428 4.82e-103 dispersed
Hepe04g0713 Hepe-Chr4:60979754 Hepe08g1761 Hepe-Chr8:34251428 3.90e-103 dispersed
Hepe08g0522 Hepe-Chr8:4577549 Hepe08g1761 Hepe-Chr8:34251428 2.28e-140 dispersed
Hepe08g1761 Hepe-Chr8:34251428 Hepe08g1888 Hepe-Chr8:48728316 0.0 dispersed
Hepe06g1222 Hepe-Chr6:61844327 Hepe08g1761 Hepe-Chr8:34251428 2.84e-161 transposed
Hepe03g1010 Hepe-Chr3:55012115 Hepe08g1761 Hepe-Chr8:34251428 1.06e-162 wgd
Hepe05g0665 Hepe-Chr5:11002837 Hepe08g1761 Hepe-Chr8:34251428 1.61e-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1761 - - - 0.0