Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g1835 | ATGGGTTCAATCAACTGGTTGGGCTTCTCTCTCTCCCCTCAAGAACAACAACTCCCACACCAACCCTCCGACCACCCTCACGATGCCGCCACCGCCTTCACCTCCGACGTCTCCGCCGTCTGCTTTGACAACCTTCCTTCTACCTATGGCGACTATGAACCCTTCAACCGCAATAATCACTCTCAAGATTGGAATAATAGTATGAAGGGTTTAGGGTCGACTCAAAGTTCGGATTTTTCAGCTTTAATCGAAACCCAACACCAACCAAAGCTTGAAAATTTTCTCGGCCACCACTCATTCACCGACCACGACCACGCCGCCGTCGTGTACACCAATGCCTCCGGCAACTACATGTTCCAAAATTGTTCTTTGGAGCTTCCAATATCTGAGGCCAACGGTGGCGGTGGTGGAAGAACCAACGCCACTGGAAACGGCAACAACAGTAGTAGCTCTATTGGGTTGTCTATGATCAAGACGTGGCTGAGAAATCAACCGGCGCCGCCGCAAGCGGTGGTCAAGAGCGGCGGAGATCACGACGGTGCAGTTCGATCAGCTCATATCACAAACGCACATACTTTATCGCTGTCGATGAATACCGGGCCACCCCCACCATCGCAGTCCTCCGGCTCGGCAGCTCTGCCACTTCTCAGGACCAACGGCGGTGGAAGCGGTGGCGAAAGCTCCTCCTCCGACACCAAACAACCCAAATCGGACGCTGAAAACGGCGCGGTTGAAGCTGTTCCGAGAAAATCCGTCGACACATTCGGACAAAGAACTTCCATCTACCGCGGTGTAACCAGACATAGATGGACAGGAAGATATGAAGCTCATCTATGGGACAATAGTTGCAGAAGAGAAGGACAAACTAGAAAAGGAAGACAAGGAGGTTATGACAAAGAAGAAAAGGCTGCAAGAGCCTACGATTTAGCAGCACTGAAATATTGGGGTACCACAACCACAACTAACTTTCCAATTAGTGATTACGAAAAAGAAGTGGAAGACATGAAGCATATGACCAGGCAAGAGTTTGTTGCGTCTCTCAGAAGGAAGAGTAGTGGGTTTTCTCGAGGAGCTTCCATTTACCGTGGAGTAACAAGACACCACCAGCATGGGAGATGGCAAGCAAGAATAGGGAGAGTTGCTGGGAATAAAGACCTCTACTTGGGAACTTTCAGTACGCAAGAGGAAGCAGCGGAGGCATACGACATAGCAGCCGTAAAGTTTCGGGGACTAAATGCAGTAACTAACTTCGACATGAGCCGTTACGATGTGAAAGCCATTCTTGAAAGCAACACATTACCCATTGGTGGTGCTGCGAAGCGCTTAAAAGACATCGCCCACTCCGACAACATTCCCCTTCACCCCCAACCATCCGACAACACCCTAACTTCACACCTTTCCGATGGAATAATCAGTACCAGCAGTGGATGGCCCTCTCCCGCCTTCCACCACCCCTATGCCTTCCACTACCCGTATGCCGCCCCACAGAACCGGCTGTGGTGTAAGCAAGAGCCCGATGCCACCCTCACTGCTGCTGACAACTTCTTCCCACACAGCGGGGCAATGGACTCCATGGACCCATACCATTGGATGGGAGCCGCGGGGGTGGACAATGGCGGATTGGGAGACATTGGAGAACTTAATTTCTTTGCTTCTTCTCCTAACGTAGATCACCCATACCATGCAACAAGGACCACCAATATGTATAATAATTATCATAACTCCTCTCATCAGCTGCAGCCGCCGCCTCCATCCACGCTGCAACCGCCGCCGCCGCCTTTCACCATTTGGAATGACACTTAA | 1803 | 51.08 | MGSINWLGFSLSPQEQQLPHQPSDHPHDAATAFTSDVSAVCFDNLPSTYGDYEPFNRNNHSQDWNNSMKGLGSTQSSDFSALIETQHQPKLENFLGHHSFTDHDHAAVVYTNASGNYMFQNCSLELPISEANGGGGGRTNATGNGNNSSSSIGLSMIKTWLRNQPAPPQAVVKSGGDHDGAVRSAHITNAHTLSLSMNTGPPPPSQSSGSAALPLLRTNGGGSGGESSSSDTKQPKSDAENGAVEAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPISDYEKEVEDMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAVKFRGLNAVTNFDMSRYDVKAILESNTLPIGGAAKRLKDIAHSDNIPLHPQPSDNTLTSHLSDGIISTSSGWPSPAFHHPYAFHYPYAAPQNRLWCKQEPDATLTAADNFFPHSGAMDSMDPYHWMGAAGVDNGGLGDIGELNFFASSPNVDHPYHATRTTNMYNNYHNSSHQLQPPPPSTLQPPPPPFTIWNDT | 600 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 45654109 | 45658643 | + | Hsped.08g18350.1 | Hepe08g1835 | 577807 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g1835 | 600 | FunFam | AP2-like ethylene-responsive transcription factor | 359 | 420 | - | - | |
Hepe08g1835 | 600 | ProSiteProfiles | AP2/ERF domain profile. | 261 | 324 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | PRINTS | Ethylene responsive element binding protein signature | 262 | 273 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | PRINTS | Ethylene responsive element binding protein signature | 400 | 420 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | CDD | AP2 | 359 | 420 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | MobiDBLite | consensus disorder prediction | 582 | 600 | - | - | |
Hepe08g1835 | 600 | MobiDBLite | consensus disorder prediction | 193 | 251 | - | - | |
Hepe08g1835 | 600 | MobiDBLite | consensus disorder prediction | 193 | 214 | - | - | |
Hepe08g1835 | 600 | MobiDBLite | consensus disorder prediction | 221 | 237 | - | - | |
Hepe08g1835 | 600 | MobiDBLite | consensus disorder prediction | 567 | 581 | - | - | |
Hepe08g1835 | 600 | ProSiteProfiles | AP2/ERF domain profile. | 360 | 418 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | SMART | rav1_2 | 261 | 330 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | SMART | rav1_2 | 360 | 424 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | Pfam | AP2 domain | 361 | 410 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | SUPERFAMILY | DNA-binding domain | 260 | 326 | IPR016177 | GO:0003677(InterPro) | |
Hepe08g1835 | 600 | SUPERFAMILY | DNA-binding domain | 359 | 420 | IPR016177 | GO:0003677(InterPro) | |
Hepe08g1835 | 600 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 183 | 454 | - | - | |
Hepe08g1835 | 600 | MobiDBLite | consensus disorder prediction | 567 | 600 | - | - | |
Hepe08g1835 | 600 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 260 | 326 | - | - | |
Hepe08g1835 | 600 | Gene3D | AP2/ERF domain | 360 | 420 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | Gene3D | AP2/ERF domain | 261 | 326 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe08g1835 | 600 | CDD | AP2 | 260 | 326 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1342 | Hepe-Chr4:69024398 | Hepe08g1835 | Hepe-Chr8:45654109 | 6.39e-104 | dispersed | |
Hepe08g1355 | Hepe-Chr8:15751383 | Hepe08g1835 | Hepe-Chr8:45654109 | 3.39e-105 | dispersed | |
Hepe08g1600 | Hepe-Chr8:23033301 | Hepe08g1835 | Hepe-Chr8:45654109 | 4.82e-74 | dispersed | |
Hepe08g1835 | Hepe-Chr8:45654109 | Hepe08g1924 | Hepe-Chr8:51016520 | 0.0 | dispersed | |
Hepe08g0110 | Hepe-Chr8:926720 | Hepe08g1835 | Hepe-Chr8:45654109 | 1.52e-98 | transposed | |
Hepe07g0569 | Hepe-Chr7:6096763 | Hepe08g1835 | Hepe-Chr8:45654109 | 4.52e-113 | transposed | |
Hepe03g0920 | Hepe-Chr3:38640390 | Hepe08g1835 | Hepe-Chr8:45654109 | 9.77e-06 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56246 | PF00847 | AP2 | 3.10E-09 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g1835 | K09285 | - | csv:101219473 | 879.396 |