Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g1860 ATGGCGGCGAAGCCCACCTCGGTTTCCTTCAGGGTTCCGTACAAGAACCTCCAGGATGCAGAGGTGGAAATGGTGGCTGTGGATGAAAACCAGCTCCAAGGGATCGATCTCAATTCTCCTTCTTCTGATAGATGTCCCAATGGAAGCCCACACAGTTCCTCGTCAACGCCTCATCTTAGATCTACCCCCAATAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCCGGTGTTCAATTTGGTTGGGCCTTACAGCTTTCCCTACTAACTCCCTATATTCAGACACTCGGAATTGAACATGCATTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGCGTCGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGTTGGCTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGATATTGGATATATACTAGGAGATACGAAGGAACATTGCAGAGTATATAAAGGTTCACGAACAAGGGCGGCTATTATCTTTGTAATAGGCTTTTGGATGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTTGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTAATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTGTTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCTTATATTTTGCCGATGAAGTTCCACTGATTGCTGTAGATCAACCACCACGTTTATCAGATTCTGCTCCTCTGTTGAATGGGAATGAACAAAATAGTCCTAACATTTTAAAACCAGAACTTAACAGTCCGAATGGGAGCAATGTTGACTATGGCTGTCAAGAAAATATGAATTTGAAAAATTCAGAATCAAAAATTGAGGAAAATCACACTGAAGGTTATTATGATGGCCCTGCAACAGTGGTAGTCAAATTGTTGACCAGTTTAAGACATTTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTTGATACGGATTGGATGGGAAGGGAAGTGTATCATGGGGACCCCAAAGGCAGTTTGACTGAAGAACAGGTTTATGATCAAGGTGTCAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGCTCTTTCTTTATAGAGCCGATGTGTCAGCGCATGGGAGCCAGGCTTGTCTGGTCAATGAGCAACTTTATTGTGTTTGTATGCATGGCGGGAACTACTATTATCAGTATAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATATTATTGGGGGAAATTCAACAATAAAAAATGCTGCCTTGGCTGTTTTTGCTCTTCTTGGTTTTCCTCTTGCTATAACATACAGTGTTCCCTTCTCTTTGACAGCAGAATTGACTGCTGATTCTGGTGGTGGGCAAGGATTGGCTATAGGAGTTCTTAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCCCTGGGTGCTGGGCCATGGGATGCTTTATTCAGTGGAGGAAATACTCCTGCATTTGCTTTGGCTTCGATATGTGCGCTTGCGGCTGGAGTTGTTGCAGTTCTTAGATTGCCTAATCACACCAACAGTTCTTTCAAATCCACAGGTTTTCATTTTGGTTGA 1815 42.59 MAAKPTSVSFRVPYKNLQDAEVEMVAVDENQLQGIDLNSPSSDRCPNGSPHSSSSTPHLRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILVGSLMIAVAVVLIGFSADIGYILGDTKEHCRVYKGSRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSNACCEACGNLKAAFLVAVLFLTICTLVTLYFADEVPLIAVDQPPRLSDSAPLLNGNEQNSPNILKPELNSPNGSNVDYGCQENMNLKNSESKIEENHTEGYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTEEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWSMSNFIVFVCMAGTTIISIISVSQYSEGIEHIIGGNSTIKNAALAVFALLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNTPAFALASICALAAGVVAVLRLPNHTNSSFKSTGFHFG 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47198077 47205859 + Hsped.08g18600.1 Hepe08g1860 577832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g1860 604 FunFam Sucrose transporter SUC2 67 291 - -
Hepe08g1860 604 PANTHER SUGAR TRANSPORTER 65 586 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Hepe08g1860 604 Pfam Major Facilitator Superfamily 76 477 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe08g1860 604 CDD MFS_SLC45_SUC 69 586 - -
Hepe08g1860 604 Gene3D MFS general substrate transporter like domains 62 588 IPR036259 -
Hepe08g1860 604 MobiDBLite consensus disorder prediction 38 59 - -
Hepe08g1860 604 SUPERFAMILY MFS general substrate transporter 68 591 IPR036259 -
Hepe08g1860 604 FunFam Sucrose transport protein SUT5 376 596 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1860 Hepe-Chr8:47198077 Hepe10g0399 Hepe-Chr10:4392310 4.72e-153 dispersed
Hepe08g1720 Hepe-Chr8:30233147 Hepe08g1860 Hepe-Chr8:47198077 9.42e-142 transposed
Hepe08g1685 Hepe-Chr8:26899017 Hepe08g1860 Hepe-Chr8:47198077 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g1860 K15378 - csv:101205348 1096.26