Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2041 ATGAGGAAGAAACGTAATAACGAGAAAAAGAAGGTAACTCTACCGCCGGAGCTTCCACCGGAGGTCACCGAGGAGGAAATTGAGGTCTCCGATGAGGATTTGCAGTTTGTCAAGGAGAACCGAGACTATGCCGTCTCTGTTTCCCGTCTAGACACTGAATCCATTACCAAGCATGTTACGCGTGTTGCTGATGTTGAGGAAGATGCTTTGGAGGCTTTATATGAAAAGCGTTTGCGCAAGAAGTCACTGCAGAAACAGGAGGAGGAAACTAAGCCCCAGGTTGTTGATCGCGTGGATGCTCTTCCTGTCAAAACACTTGACGGGAAACTCTACTACCGGACATCAAAAGCATCCGATGCACCTGAGAATGGTGCGAATGAAGAGGCAGAAGAAGAGGACCCGGGAGATAATAGTATATTTAAGTTAACTAAAGCAGAAAGGAGGGCAAAAGAAAAGAAAATTAAGAAGGTTGGCAAGAAACAAGAGGATGTAACCAAATTTGAAGAAGTTCAACCAACCCCACAAGCAGCAGTTGTGGCTGAAGTGATAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAACAGAAACTTGCAGAGCTTGGAATTGCATTGCTGTCAGACCCAAATTCCAATATTAAATCTTTGAAGGAGATGCTACAGATTGCTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTTTATCATTATTGGCTGTTTTTAAAGACATTATACCGGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTAGAAATGAAAGTATCCAAGGATGTTAAGAAAATGCGGTACTATGAGTCTACTCTTCTCACTGTTTATAAGGGATACCTGCAGAAGCTAATCTCATTAGAAAAACTGAAGTCATTTCAGCACGTGGCTATTCGCTGTATCTGTACTTTGCTTGATGCAGTTCCTCACTTCAACTTTCGAGAGACATTGTTAGATATCGTTGTTAAAAACATAGGCTCCTCTGACGATGCTGTAAGAAAACTTTGTTGTGGTGCTATTAAATCTTTATTTATCAACGAGGGAAAGCATGGCGGTGAAGCGACTGTGGAGGCTGTCAGGTTGATTGCTATTCTTGTGAAATCTCATGACTGCCAATTGTATCCTGATTCCATCGAGCCTTTCGTACATTTAACATTTGACGAGGCTCTGGGGAAAGCAGTAAAGAAAGACGAGCATAGTAAAGCAAAGAACAAAAAACAAAGGAAAATGAAGAATCGTGAGGAACCGAGTCATTTGCAAGGGAATGATGGAAAACAAAGTATGAGGACAAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCTACAGATGTAATTAAGCAACGAGAGATGCAGTCAGATACACTTTCTGCTGTATTTGAAACATATTTCCGGATCTTAAGGCATACAATGCAGTCATTAACTGCTAGGCCTGATGCAAGTATTACTTCTACTACTGGCCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGATTGGGGAAATTCTCGCATCTCATTGATTTAGATTTCATGGGTGATCTTATGAATTATCTAAAAAGGCTTGCTTCTGGTGGTGATAATTCTTCTGAGAAACCGTCACATTGTTTGACCGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTAAATGTTGATCTACAGGACTTTTTTGTCCAGCTATACAATATTGTACTTGAGTACAGGCCTGGGAGAGATAATGGTGATGTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGATATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTTAAGCATCTTCTTCAGAAAAATCTCAAATGTCGCAACCTTTTGGAAAATGATGCTGGGGGAGGTTCGGTGTCTGGCACAATCGCGAAATATCAGGCATATGCTTCTGATCCAAATTTGAGTGGGGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAGCTATCTCAACGATGGCTGCTAGCATATCAAGCATGAGTAGTACTCAAAACCAAGTATATATCGCCACTATTTCTCCCCAACAGGCATTCAAAGACTTGTCGCTGAAACAGGAGTCTTTTAACCCACAATTTAACGTCAAAAAAGTTAACAAGAGGAAAAAAGCTAGCGGATCTTCTCAGTCTACTTTCGATACGTGCAGCGCCATCGCCATCGACGAAAATGAGGTGAAGGAAAAGCTTTCAACAAGATTCGCTCTTCTCCGGGACATCAAGGACAATGAAAGATTAAGAGCTGAATTGGATCGTACCTCTTTGTCGTTGCAGCTATATGAAGAATACAAAAGGCAAAAGAAAAAGTCGAAAAAGTCGAGGAATATTTGA 2490 41.49 MRKKRNNEKKKVTLPPELPPEVTEEEIEVSDEDLQFVKENRDYAVSVSRLDTESITKHVTRVADVEEDALEALYEKRLRKKSLQKQEEETKPQVVDRVDALPVKTLDGKLYYRTSKASDAPENGANEEAEEEDPGDNSIFKLTKAERRAKEKKIKKVGKKQEDVTKFEEVQPTPQAAVVAEVIEDLTAEKTFESKKQKLAELGIALLSDPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKDVKKMRYYESTLLTVYKGYLQKLISLEKLKSFQHVAIRCICTLLDAVPHFNFRETLLDIVVKNIGSSDDAVRKLCCGAIKSLFINEGKHGGEATVEAVRLIAILVKSHDCQLYPDSIEPFVHLTFDEALGKAVKKDEHSKAKNKKQRKMKNREEPSHLQGNDGKQSMRTKFTEEVAADYRAASLATDVIKQREMQSDTLSAVFETYFRILRHTMQSLTARPDASITSTTGPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDNSSEKPSHCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLEYRPGRDNGDVLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVKHLLQKNLKCRNLLENDAGGGSVSGTIAKYQAYASDPNLSGALASVLWELNLLWKHYHPAISTMAASISSMSSTQNQVYIATISPQQAFKDLSLKQESFNPQFNVKKVNKRKKASGSSQSTFDTCSAIAIDENEVKEKLSTRFALLRDIKDNERLRAELDRTSLSLQLYEEYKRQKKKSKKSRNI 829
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 57271235 57279991 - Hsped.08g20410.1 Hepe08g2041 578013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2041 829 MobiDBLite consensus disorder prediction 112 142 - -
Hepe08g2041 829 MobiDBLite consensus disorder prediction 1 27 - -
Hepe08g2041 829 Pfam CBF/Mak21 family 554 709 IPR005612 -
Hepe08g2041 829 MobiDBLite consensus disorder prediction 400 431 - -
Hepe08g2041 829 Pfam Nucleolar complex-associated protein 195 285 IPR011501 -
Hepe08g2041 829 SUPERFAMILY ARM repeat 215 609 IPR016024 -
Hepe08g2041 829 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 766 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Hepe08g2041 829 Coils Coil 142 162 - -
Hepe08g2041 829 PIRSF Noc3 2 828 IPR016903 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0024 Hepe-Chr2:375842 Hepe08g2041 Hepe-Chr8:57271235 0.0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2041 K14834 - csv:101213821 1259.2