Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2053 ATGTTGGACGGTGGTCAAAAATTCACTGGAATGATCGATTTAAACGAGCATGCATACGATCTATCACAAGGGTTTTACCATAAACTTGGTGAGGGAACAAACATGTCTATTGACAGCTTTTCAAGCTTGCAAACGAGCAATGATGGAGGATCAGTTGCCATGTCTTTAGATAACAGCAGTGTAGGATCAAATGAATCTCACACTCGGATCTTAAATCACCAAGGCTTGCGACGGCGTGCAAATGACAACCATACTTTTCAACACAGTGTTAACCGTCGTGGAAGAGTTACTCATCACCTGAGTGATGATGCACTAGCCAGAGCTTTGTTTGACAGTAATACACCCACCCAGGGTCTTGAGAATTTTGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTTGCTATCAAGATCTTGGAGAGGCCAGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAGCAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGTCATAAGCCTATGGTTTGGTGCATTGTTACTGAATATGCAAAGGGTGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGCTCCGTCCCACTGAAATTAGCTGTCAAACAAGCTCTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCACAGGGACTTGAAATCAGACAACCTTTTGATTTTTGCAGATAAGTCTATCAAGGTTGCTGACTTTGGAGTGGCCCGGATTGAGGTGCAAACAGAGGGAATGACACCCGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACTTGTATAGCTTTGGCATCGTTCTCTGGGAGCTCATTACTGGAATGCTCCCATTCCAGAACATGACAGCCGTTCAGGCCGCCTTTGCAGTTGTTAACAAGGGAGTCCGTCCTATCATTCCCAATGATTGCTTACCTGTTTTGAGCGACATCATGACCCGGTGCTGGGATCCCAACCCTGATGTTCGGCCATCGTTTACTGAGGTCGTCAGAATGCTCGAGAATGCGCAGACTGAGATCATGACGACCGTCCGTAAGGCTCGTTTCAGGTGTTGCATTACGCAGCCGATGACAACAGACTGA 1242 46.46 MLDGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFSSLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDPNPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCITQPMTTD 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 57646493 57656947 + Hsped.08g20530.1 Hepe08g2053 578025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2053 413 ProSiteProfiles Protein kinase domain profile. 132 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 FunFam Serine/threonine-protein kinase isoform 1 122 214 - -
Hepe08g2053 413 Gene3D Transferase(Phosphotransferase) domain 1 215 408 - -
Hepe08g2053 413 PANTHER SERINE-THREONINE PROTEIN KINASE 75 388 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe08g2053 413 SMART serkin_6 132 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 SUPERFAMILY Protein kinase-like (PK-like) 117 386 IPR011009 -
Hepe08g2053 413 CDD STKc_MAP3K-like 139 386 - -
Hepe08g2053 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Hepe08g2053 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2053 413 FunFam serine/threonine-protein kinase HT1 215 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0398 Hepe-Chr2:3817020 Hepe08g2053 Hepe-Chr8:57646493 1.79e-81 dispersed
Hepe04g1854 Hepe-Chr4:73514455 Hepe08g2053 Hepe-Chr8:57646493 1.90e-95 dispersed
Hepe05g1592 Hepe-Chr5:65543665 Hepe08g2053 Hepe-Chr8:57646493 2.17e-20 dispersed
Hepe07g1910 Hepe-Chr7:62827043 Hepe08g2053 Hepe-Chr8:57646493 4.45e-88 dispersed
Hepe07g2231 Hepe-Chr7:66746012 Hepe08g2053 Hepe-Chr8:57646493 6.49e-83 dispersed
Hepe08g0707 Hepe-Chr8:6358938 Hepe08g2053 Hepe-Chr8:57646493 3.25e-38 dispersed
Hepe08g2053 Hepe-Chr8:57646493 Hepe09g0241 Hepe-Chr9:2088187 3.62e-72 dispersed
Hepe06g0891 Hepe-Chr6:56192594 Hepe08g2053 Hepe-Chr8:57646493 2.31e-79 wgd
Hepe07g1240 Hepe-Chr7:32529597 Hepe08g2053 Hepe-Chr8:57646493 2.45e-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73074 PF07714 PK_Tyr_Ser-Thr 5.60E-65 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2053 - - - 0.0