Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2061 ATGGCGAGAGGAGGTGGAGGAGGAGGAGGTCTGAAGAAAGATGAATCAGTCGCGGTGGCGATCGATAAAGATAAATTTAGCCAACAGGCTTTGAAATGGACGATCGATCGTCTTCTTAGCAAAGGCCAAGCTCTTACTCTACTTCATGTCAAGCAGAAACCTTCCAATTCCATGACGAATCTCTCCGATTCCGATGATAATCACGCCAGAGATCAGTTCTTCCTCCCGTTTCGTTGCGTCTGCACAAGAAACAATATACAATGCAATGAGGTGATGTTGGAAGATGGAGAGATTTCAAAAACATTAATCAATTATGTCAACAAAAATTGTATAGACATTTTAGTACTTGGTGCCCCTTGGAGAGTTGGCATTGTCAAGAGATTCAAGTCAGATATCCCAAGTAGTGTATCAAAAGGAGCACCAGACTTTTGCACAGTTTACATTATTGGTAACAAAGGCAAGGTTTCTTCAATGCGACAATCCACAGCCCCGGCGCCTGCAAAGCCCATTACTTCGCCGACTCCTCAACAGCCCGCCCCGCCACGCCCTCAACTGTTGCATCAACTCACCAACGCCTCTGAGTTCGCGGTCGAGTACCCGATCCAACCGCGCTTCCAACCACAAAGATCAATTGGTAATAATAATAAAATGTTTTGGCCTTGGGGCAGATCGCCATTTACCCGGCCGGGTTCAAGGGCTTCAATGACCAAAGGGTTGGACCCATCCGATTCCGACATATCGTATGTCAGCAACGGCAGGCGGAGCGTCGACCGAGGCTTCCCTCCGGCGTGGAGCTCTGGCACCGGCACCGGCACGTGCGGCGACTCGTATCGGCTTTCTAACGTCTCTGAGTTTGAACTTTTCAGCCCCGGTTCGTCCTCGCCTTCTCCTCTAGTGACAAATGGAAGGAAGTCCATCGATAACAATAACACTTACTCAAATGGAAGGAAGTCCATTGATAACAATAACACTTACTCAAATGGAAGGAAGTCCATCGATAACAATAACACTTACTCACAAGAGATATCCTCTTCTGAGATGAGAAGGCTGAAATTGGAGCTCAAACAAACCATGGACATGTACAGTACAGCCTGCAAAGAAGCCTTAAACGCCAAGCAAAAGGCGAACGAGCTAACTCGGTGGAAAGTGGAAGAAGAACAGAGATTAGAAGAGGCGAAAATGGCGGAGGGAGTAGCATTAGCAATGGCGGAGAAGGAGAAGGTGAAATGCAAAGCGGCAATGCAGGCAGCCGAAGCTGCACAGAAGATCGCTGCAATCGAGTCGAGGAAACGAGTGAGCGCAGAGAAAATGGCGGACATGGAAGCAGAGGAAACCAAAACCGCGCTTGGAGGTTTCGGCCGTGGAGATATCGGTTATAGAAAGTACTCAATCGAGGAAATCCATGCCGCCACCGACGGCTTCTCCGAATCTCTGAAGATCGGGGAAGGCGGTTACGGTCCTGTCTACCGTGGAGAACTCGACCACACGCCGGTCGCGATCAAGGTTCTCCGACCGGACGCCGCCCAAGGCCGATCGCAATTTCAACAAGAGGTCGAGGTTCTAAGCTGTATTAGACATCCAAATATGGTTCTCCTCCTCGGAGCTTGTCCGGAGAACGGCTGTTTAGTGTACGAATTAATGACGAATGGAAGCTTAGAGGATTGTCTCTTCCGTAAAGACACCGATCCAGTTCTTTCGTGGCAGTTACGATTCCGAATCGCGGCGGAGATCGCGACGGGACTTCTCTTCCTCCACCAAACCAGACCAGAGCCGATCGTGCATCGAGATCTGAAACCGGGTAACATATTGCTAGATCAGAACTACGTGAGTAAAATCAGCGACGTAGGATTGGCGAGGTTGGTTCCGCCGTCGGTAGCGAATTCAGTGACTCAGTATCGGATGACGGCGACGGCAGGGACGTTCTTCTACATAGATCCGGAGTATCAGCAAACAGGAATGCTAGGGATTAAATCAGACGTTTACTCGCTGGGAGTGATGCTTCTGCAGATACTCACATCGAGGCCGCCGATCGGACTGGCACACGCCGTCGGGAGGGCGATTGATAAGGGGAAATTTGCAGAGATGCTTGATCCGAATGTGAAGGATTGGCCGGTGGAAGACGCGTTGAGATTTGCCAAGCTTTCGATTCAGTGTGCGGAGATGAGGAAGAGAGATCGGCCGGATCTTGGGAAGGAGGTGCTGCCGGAGCTTAATCGGTTGAGAACGATGGCGGAAGAGAGTATGGAAATGCGGTCGTCGTTCGACGGCAGCAGCGCGTCTTCTTCGCCATGTGCAAGCCTGGCTTCTTCTTTTCGGGTAACTTAG 2325 50.28 MARGGGGGGGLKKDESVAVAIDKDKFSQQALKWTIDRLLSKGQALTLLHVKQKPSNSMTNLSDSDDNHARDQFFLPFRCVCTRNNIQCNEVMLEDGEISKTLINYVNKNCIDILVLGAPWRVGIVKRFKSDIPSSVSKGAPDFCTVYIIGNKGKVSSMRQSTAPAPAKPITSPTPQQPAPPRPQLLHQLTNASEFAVEYPIQPRFQPQRSIGNNNKMFWPWGRSPFTRPGSRASMTKGLDPSDSDISYVSNGRRSVDRGFPPAWSSGTGTGTCGDSYRLSNVSEFELFSPGSSSPSPLVTNGRKSIDNNNTYSNGRKSIDNNNTYSNGRKSIDNNNTYSQEISSSEMRRLKLELKQTMDMYSTACKEALNAKQKANELTRWKVEEEQRLEEAKMAEGVALAMAEKEKVKCKAAMQAAEAAQKIAAIESRKRVSAEKMADMEAEETKTALGGFGRGDIGYRKYSIEEIHAATDGFSESLKIGEGGYGPVYRGELDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYELMTNGSLEDCLFRKDTDPVLSWQLRFRIAAEIATGLLFLHQTRPEPIVHRDLKPGNILLDQNYVSKISDVGLARLVPPSVANSVTQYRMTATAGTFFYIDPEYQQTGMLGIKSDVYSLGVMLLQILTSRPPIGLAHAVGRAIDKGKFAEMLDPNVKDWPVEDALRFAKLSIQCAEMRKRDRPDLGKEVLPELNRLRTMAEESMEMRSSFDGSSASSSPCASLASSFRVT 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 57864274 57870554 + Hsped.08g20610.1 Hepe08g2061 578033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2061 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2061 774 MobiDBLite consensus disorder prediction 287 342 - -
Hepe08g2061 774 PANTHER OS02G0152300 PROTEIN 17 754 IPR051348 -
Hepe08g2061 774 SUPERFAMILY Protein kinase-like (PK-like) 458 728 IPR011009 -
Hepe08g2061 774 MobiDBLite consensus disorder prediction 158 184 - -
Hepe08g2061 774 SMART serkin_6 474 734 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2061 774 Coils Coil 400 420 - -
Hepe08g2061 774 Pfam Protein kinase domain 477 727 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2061 774 MobiDBLite consensus disorder prediction 751 774 - -
Hepe08g2061 774 ProSiteProfiles Protein kinase domain profile. 474 737 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2061 774 MobiDBLite consensus disorder prediction 168 182 - -
Hepe08g2061 774 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 149 - -
Hepe08g2061 774 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 448 546 - -
Hepe08g2061 774 MobiDBLite consensus disorder prediction 226 245 - -
Hepe08g2061 774 FunFam U-box domain-containing protein 51 547 747 - -
Hepe08g2061 774 MobiDBLite consensus disorder prediction 748 774 - -
Hepe08g2061 774 Coils Coil 423 443 - -
Hepe08g2061 774 Gene3D Phosphorylase Kinase; domain 1 456 546 - -
Hepe08g2061 774 Gene3D HUPs 15 149 IPR014729 -
Hepe08g2061 774 CDD STK_N 16 153 - -
Hepe08g2061 774 Pfam Universal stress protein family 17 131 IPR006016 -
Hepe08g2061 774 Gene3D Transferase(Phosphotransferase) domain 1 547 760 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0453 Hepe-Chr2:4392501 Hepe08g2061 Hepe-Chr8:57864274 7.72e-238 dispersed
Hepe08g1406 Hepe-Chr8:16578897 Hepe08g2061 Hepe-Chr8:57864274 5.40e-22 dispersed
Hepe08g2061 Hepe-Chr8:57864274 Hepe08g2676 Hepe-Chr8:68800887 2.00e-110 dispersed
Hepe08g2061 Hepe-Chr8:57864274 Hepe10g0326 Hepe-Chr10:3479889 1.39e-250 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73076 PF00069 Pkinase 1.90E-38 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2061 - - - 0.0