Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2107 ATGATGGGTGAGGAGGCAATGGAGAATAATAAGAAAGTGATGAGAGAAAACAAATTGCAAAGAAGCCATTTTGATGTGTTGGGACTTTGCTGTTCTTCAGAAGTCCCTTTGATTGAAAACATCCTCAAACCCCTCGAAGGAATCAAACACATCTCTGTCATTGTTCCTACAAGAACTCTCATTGTCGTCCATGATTCCCTCCTCATTTCTCAACTTCAAATTGTGAAAGCTCTAAATGAAGCAAGATTGGAGGCAAATGTACAATTCAATGGAAAGGGAATTAGCAAGAAGAAATGGCCAAGTCCTTATGCAATAGCCAGTGGGTTCCTTCTAACGGCGTCGTTTTTGAAGTATGTGTACCACCCATTGCAGTGGCTGGCCGTCGCCGCCGTCGCCGCCGGCATCTTTCCGATTCTCCTTAAAGCCATTTCCGCCATTCGCCACCTCAGGATCGATGTCAACATTCTTGCTGTTATTGCTGTTGTGGGGACAATTGCAATGAATGACTACATGGAAGCTGGAAGTATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAATCAAGAGCAAGCCACAAGGCCAATGCTGCAATGTCCTCACTGATGAACTTAGCCCCTCAAAGAGCAACCATAGCTGAAAGTGGAGAGGTTGTGGATGCAAAGGAAGTCAAATTGAACAGTGTTTTGGGTGTGAAGGCTGGTGAAGTTATTCCAATTGATGGGATTGTTGTGGAAGGAAAATGTGAAGTTGATGAGAGAACTTTGAGTGGTGAAACTTTCCCAGTTGCCAAACACAAAGATTCTCTTGTTTGGGCTGGTACCATCAACTTAAATGGTTATATTAGTGTTCAAACTACTGTTGTTGCTGAGGACTGTGTGGTGGCAAAAATGGCTGAGCTTGTAGAAGAAGCCCAAAATAACAAATCAAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACCCCAGCTGTTTTTGTCATATCAGCTTGTATTGCAGCCATTCCAGCTGCATTGAGAGTTCACAATCTCAACCATTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCATGTCCCTGTGCCCTAATCCTCTCGACCCCGGTCGCCGCCTTTTGCGCCCTTACGAAGGCCGCCATGGCCGGAGTTCTGATCAAAGGCGGCGACCACCTTGAAGTTCTTGCAAAGATTAAGGTTATGGCCTTCGACAAGACTGGCACAATCACTAGAGGTGAATTTGTGGTAACAGATTTTCGAGCTCTACGAGAGGATATTAGCTTGCACACCTTGCTTCATTGGGTTTCAAGCATTGAGAGCAAATCAAGCCATCCAATGGCAGCGGCCCTTGTGAACCATGGAAAGTTTCTATCTGTTGATCTTAAACCTGAAAACGTCGAGGAATTTGAGAATTTTCCAGGAGAAGGTGTTCGTGGGAAGATAGATGGGAACAATATTTACATCGGAAGTAGAAAAATTGCAGCCAGAGCTGGCTGCGCAACAGTTCCGAACTTAGACGATGAAACGAAACAAGGGCAAACCCTAGGATATGTCTTTTGTGGGGCGACGTTAGCGGGATCGTTCGGTCTTTCAGATGCTTGTCGTTCGGGAGTCAAAGAGGCGATCGAGGAGATTAAGAGTTTTGGTATAAAAACAGCTATGCTTACTGGAGATTGTAGTGCAGCAGCCATGCATGCCCAACAACAGCTCGGGAATGTGCTCGACGTAATCCATTCAGAACTTCTACCAAAGGAGAAGGCAAATATCATAAAAGAATTCAAAAGGGATGGACCAACCGCCATGGTTGGAGATGGCTTAAATGACACCCCAGCATTAGCCACAGCTGATATTGGCATATCAATGGGCGTTTCAGGTTCAGCATTAGCCACTGAAACTGGGAATGTGATCCTAATGTCAAATGACTTGACAAAAATTCCAAAAGCTATCAAAATAGCAAAGAATTCCCATGCAAAAGTAGTTCAAAATATCATTTTGTCCATCGGTACGAAGGCCGCAATCCTCGGCCTGGCATTCGCCGGACATCCACTCGTCTGGGCGGCTGTTCTCGCCGATGTCGGTACTTGCCTATTGGTCATCTTGAACAGCATGCTCCTTTTGAGAGGTTCAACTGATCATAAACATGGGAAGAAATGTTGCAAATCTTCCAAACCATGTTCGACAAAACATGACGGTAACGCCCAATCGTCTCATCATCATCATCGATGCCATGGCGTCGACGATCGGTCGCCTAGTCATTCAAATCAATGTGAACAAAAACCACTTGAGAAAGAGAATAATGGAAATTCTTCAAGAAAAGTGGCTGAATCAAATTGTAATTGCCACTCACATCATGTTGCTATTGACATTCAAGAAGGTATTGAGTTGTGA 2388 44.3 MMGEEAMENNKKVMRENKLQRSHFDVLGLCCSSEVPLIENILKPLEGIKHISVIVPTRTLIVVHDSLLISQLQIVKALNEARLEANVQFNGKGISKKKWPSPYAIASGFLLTASFLKYVYHPLQWLAVAAVAAGIFPILLKAISAIRHLRIDVNILAVIAVVGTIAMNDYMEAGSIVFLFSIAEWLESRASHKANAAMSSLMNLAPQRATIAESGEVVDAKEVKLNSVLGVKAGEVIPIDGIVVEGKCEVDERTLSGETFPVAKHKDSLVWAGTINLNGYISVQTTVVAEDCVVAKMAELVEEAQNNKSKTQRFIDECAKYYTPAVFVISACIAAIPAALRVHNLNHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGGDHLEVLAKIKVMAFDKTGTITRGEFVVTDFRALREDISLHTLLHWVSSIESKSSHPMAAALVNHGKFLSVDLKPENVEEFENFPGEGVRGKIDGNNIYIGSRKIAARAGCATVPNLDDETKQGQTLGYVFCGATLAGSFGLSDACRSGVKEAIEEIKSFGIKTAMLTGDCSAAAMHAQQQLGNVLDVIHSELLPKEKANIIKEFKRDGPTAMVGDGLNDTPALATADIGISMGVSGSALATETGNVILMSNDLTKIPKAIKIAKNSHAKVVQNIILSIGTKAAILGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLRGSTDHKHGKKCCKSSKPCSTKHDGNAQSSHHHHRCHGVDDRSPSHSNQCEQKPLEKENNGNSSRKVAESNCNCHSHHVAIDIQEGIEL 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 59775369 59787058 - Hsped.08g21070.1 Hepe08g2107 578079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2107 795 Gene3D - 413 534 IPR023299 GO:0000166(InterPro)
Hepe08g2107 795 Pfam E1-E2 ATPase 204 380 - -
Hepe08g2107 795 Pfam haloacid dehalogenase-like hydrolase 398 616 - -
Hepe08g2107 795 SUPERFAMILY Calcium ATPase, transduction domain A 216 301 IPR008250 -
Hepe08g2107 795 FunFam Copper-transporting ATPase 1, putative 191 305 - -
Hepe08g2107 795 FunFam Putative cadmium/zinc-transporting ATPase 3 16 89 - -
Hepe08g2107 795 ProSiteProfiles Heavy-metal-associated domain profile. 20 86 IPR006121 GO:0046872(InterPro)
Hepe08g2107 795 SFLD p-type atpase 384 653 IPR044492 -
Hepe08g2107 795 PRINTS P-type cation-transporting ATPase superfamily signature 548 558 - -
Hepe08g2107 795 PRINTS P-type cation-transporting ATPase superfamily signature 402 416 - -
Hepe08g2107 795 PRINTS P-type cation-transporting ATPase superfamily signature 251 265 - -
Hepe08g2107 795 PRINTS P-type cation-transporting ATPase superfamily signature 626 638 - -
Hepe08g2107 795 PRINTS P-type cation-transporting ATPase superfamily signature 602 621 - -
Hepe08g2107 795 NCBIfam heavy metal translocating P-type ATPase 153 705 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Hepe08g2107 795 MobiDBLite consensus disorder prediction 737 769 - -
Hepe08g2107 795 ProSitePatterns E1-E2 ATPases phosphorylation site. 404 410 IPR018303 -
Hepe08g2107 795 SFLD Haloacid Dehalogenase 384 653 - -
Hepe08g2107 795 SUPERFAMILY Calcium ATPase, transmembrane domain M 154 492 IPR023298 -
Hepe08g2107 795 SUPERFAMILY HAD-like 401 703 IPR036412 -
Hepe08g2107 795 Gene3D - 394 653 IPR023214 -
Hepe08g2107 795 CDD P-type_ATPase_HM 104 704 - -
Hepe08g2107 795 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 14 781 IPR051014 GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER)
Hepe08g2107 795 Gene3D - 190 305 - -
Hepe08g2107 795 MobiDBLite consensus disorder prediction 729 773 - -
Hepe08g2107 795 Gene3D - 16 88 - -
Hepe08g2107 795 NCBIfam cadmium family heavy metal-translocating P-type ATPase 153 508 - -
Hepe08g2107 795 NCBIfam HAD-IC family P-type ATPase 176 679 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2107 795 FunFam Putative cadmium/zinc-transporting ATPase 3 413 534 - -
Hepe08g2107 795 SUPERFAMILY HMA, heavy metal-associated domain 15 86 IPR036163 GO:0046872(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2107 Hepe-Chr8:59775369 Hepe09g0464 Hepe-Chr9:4231993 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2107 K01534 - csv:101203668 1255.74