Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2119 ATGGGAAACGATACTTTAACTCTGGAGGGGATCAAGAACGAGACTGTTGATCTGGAGAAAATTCCTATTGATGAAGTGTTTGAGCAGCTGAAATGTACAAGAGAAGGTTTAAGTTCTCAAGAAGGGGAGAACCGTATTCAAATCTTTGGTCCCAACAAGCTAGAAGAGAAAAAGGAAAGCAAGTTTCTGAAGTTTCTTGGTTTTATGTGGAATCCCCTGTCTTGGGTCATGGAAGCAGCAGCTATCATGGCCATTGCTTTGGCCAATGGCGGCGGTAAGGGCCCGGATTGGCAGGATTTCGTCGGTATCGTCTGTCTGTTGGTTATCAACTCCACCATCAGTTTCATTGAAGAGAACAATGCTGGTAATGCAGCAGCTGCTCTTATGGCTGGTCTTGCACCTAAAACTAAGGTTCTGAGGGATGGAAAATGGTGCGAACAAGATGCAGCAATTCTGGTTCCAGGAGATGTGATTAGTGTGAAATTGGGAGACATCATCCCGGCTGATGCTCGTCTTCTCGAGGGTGATCCGTTAAAGATCGATCAATCTGCCTTGACTGGAGAATCACTTCCTGTAACCAAGAGTCCAGGGGATGAAGTTTTCTCAGGCTCAACTTGCAAACAAGGAGAAATTGAAGCTATTGTTATTGCCACTGGTGTCCACACCTTCTTTGGAAAGGCAGCTCATCTTGTTGACAGCACCAACCAAGTTGGTCACTTCCAGAAGGTTCTCACTGCCATTGGAAACTTCTGTATTTGCTCCATTGCCATTGGTATGCTGATCGAGATCATCGTCATGTACCCGATCCAACGTCGTGCCTACCGAGACGGAATCGACAACCTTTTGGTTCTCTTGATTGGAGGCATTCCAATTGCTATGCCCACTGTCTTGTCTGTGACAATGGCTATTGGATCTCACAAGCTGTCCCAACAGGGTGCTATCACCAAGAGAATGACCGCTATCGAAGAAATGGCTGGTATGGACGTCCTCTGCAGTGACAAAACCGGAACGCTGACTCTTAACAAGTTGAGTGTTGACAAGAACTTGATTGAGGTGTTTATCAAGGGCGTAGACAAAGAGCATGTCATTCTTCTTGCTGCAAGGGCTTCTAGGACTGAAAACCAGGATGCAATTGATGCTGCCATGGTTGGAATGCTCGCAGACCCAAAAGAGGCAAGAGCTGGAATTAGAGAAATTCACTTCTTGCCATTCAACCCTGTGGATAAGAGAACTGCTTTGACTTACATTGATAACAATGGAAACTGGCACCGTGCTAGCAAGGGTGCTCCCGAGCAGATCTTGACTCTTGCCAACTGCAAAGAGGACTTCAAGAGGAAGGTGTTTTCTGTAATTGACAAGTTTGCCGAGCGTGGGCTTCGATCGTTGGCTGTTGCTAGACAGGAAGTGCCTGAGAAGACTAAGGAGAGTTCCGGTACTCCATGGCAATTCGTTGGTTTGTTGCCACTTTTTGATCCACCTAGACACGACAGTGCAGAAACCATCCGCAGGGCTCTCAACTTGGGTGTGAATGTAAAGATGATTACTGGTGATCAACTTGCTATTGCAAAGGAAACCGGTCGAAGACTTGGAATGGGAACAAATATGTATCCATCTTCTTCCTTACTCGGCCAGCACAAGGACGAAAGCATTGCTGGACTACCAGTTGAAGAGTTGATTGAGAAGGCTGATGGATTTGCCGGAGTGTTTCCAGAACACAAATATGAAATCGTAAAGAAGTTGCAAGAGAGAAAGCACATTTGTGGAATGACAGGAGATGGTGTGAATGATGCTCCTGCTTTAAAGAAGGCAGACATTGGTATTGCTGTTGCTGATGCTACTGATGCTGCACGAGGCGCTTCTGACATCGTTCTTACCGAGCCTGGATTGAGTGTTATCATCAGTGCCGTGTTGACCAGCAGAGCAATTTTCCAGAGGATGAAGAACTATACCATTTATGCAGTTTCCATCACTATTCGTATTGTGTTTGGTTTCATGTTTATTGCCCTCATTTGGAAGTTCGATTTCTCACCCTTCATGGTTTTGATTATCGCCATCTTGAACGACGGTACAATTATGACAATTTCAAAGGACAGGGTGAAGCCATCTCCGTTACCCGACAGTTGGAAACTGAAAGAGATTTTCGCTACCGGGGTAGTACTCGGAGGCTACATGGCATTGATGACGGTTATATTCTTTTGGTTAATGGACGGAACCAACTTCTTCACCGATAAATTCGGTGTAAGATCCATTCGTCATAATGAGGATGAAATGATGGCTGCTTTGTACCTGCAAGTCAGTATTGTCAGCCAGGCTTTGATTTTCGTAACTAGATCGCGCAGCTGGTCATTTGTCGAGCGACCTGGACTTCTATTACTCGGCGCTTTCTTCGTTGCACAGCTGGTTGCAACTTTGATCGCCGTGTATGCTAACTGGGGATTTGCAAAGATCAAGGGAGTCGGATGGGGATGGGCCGGTGTCGTCTGGATTTACAGCATTGTTTTCTATATTCCACTCGATATCATGAAGTTTGCTATTCGATACATCTTGAGCGGAAAGGCGTGGAACAACTTGTTAGATAACAAGACTGCTTTCACCACCAAGAAAGACTATGGAAAAGAGGAGAGAGAAGCTCAATGGGCTCTTGCTCAAAGGACACTACATGGACTTCAACCTCCCGAGTCGACTAACATCTTCTCCGAAAAGAGCAGCTACAGAGAACTCTCTGAGATCGCCGAGCAAGCCAAGAGACGTGCCGAGATTGCAAGGCTCCGAGAGCTCAACACGCTCAAGGGTCACGTCGAGTCCGTGGTGAAGTTGAAGGGGCTCGACATCGACACCATCCAGCAACACTACACAGTGTGA 2862 46.26 MGNDTLTLEGIKNETVDLEKIPIDEVFEQLKCTREGLSSQEGENRIQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEQDAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKSPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLIEIIVMYPIQRRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFIKGVDKEHVILLAARASRTENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTYIDNNGNWHRASKGAPEQILTLANCKEDFKRKVFSVIDKFAERGLRSLAVARQEVPEKTKESSGTPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYMALMTVIFFWLMDGTNFFTDKFGVRSIRHNEDEMMAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLLGAFFVAQLVATLIAVYANWGFAKIKGVGWGWAGVVWIYSIVFYIPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPESTNIFSEKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 953
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 59969002 59975957 - Hsped.08g21190.1 Hepe08g2119 578091
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2119 953 Pfam haloacid dehalogenase-like hydrolase 327 604 - -
Hepe08g2119 953 FunFam Plasma membrane ATPase 134 218 - -
Hepe08g2119 953 SUPERFAMILY HAD-like 327 637 IPR036412 -
Hepe08g2119 953 Gene3D - 902 953 - -
Hepe08g2119 953 Gene3D - 134 218 - -
Hepe08g2119 953 Gene3D - 328 627 IPR023214 -
Hepe08g2119 953 FunFam Plasma membrane ATPase 343 490 - -
Hepe08g2119 953 PANTHER CALCIUM-TRANSPORTING ATPASE 19 877 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Hepe08g2119 953 Coils Coil 904 924 - -
Hepe08g2119 953 Gene3D - 343 490 IPR023299 GO:0000166(InterPro)
Hepe08g2119 953 PRINTS H+-transporting ATPase (proton pump) signature 762 783 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2119 953 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2119 953 PRINTS H+-transporting ATPase (proton pump) signature 621 646 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2119 953 PRINTS H+-transporting ATPase (proton pump) signature 590 606 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2119 953 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2119 953 NCBIfam HAD-IC family P-type ATPase 565 679 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2119 953 NCBIfam HAD-IC family P-type ATPase 103 538 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe08g2119 953 SFLD p-type atpase 313 641 IPR044492 -
Hepe08g2119 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Hepe08g2119 953 FunFam ATPase 4 plasma membrane-type 576 817 - -
Hepe08g2119 953 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Hepe08g2119 953 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 808 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Hepe08g2119 953 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Hepe08g2119 953 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Hepe08g2119 953 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Hepe08g2119 953 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Hepe08g2119 953 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Hepe08g2119 953 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Hepe08g2119 953 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Hepe08g2119 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 849 IPR023298 -
Hepe08g2119 953 CDD P-type_ATPase_H 36 843 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Hepe08g2119 953 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Hepe08g2119 953 Pfam E1-E2 ATPase 133 310 - -
Hepe08g2119 953 SFLD C1.7: P-type atpase like 313 641 - -
Hepe08g2119 953 Gene3D - 96 817 - -
Hepe08g2119 953 FunFam Plasma membrane ATPase 483 638 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2084 Hepe-Chr1:85476883 Hepe08g2119 Hepe-Chr8:59969002 0.0 dispersed
Hepe02g1312 Hepe-Chr2:16648267 Hepe08g2119 Hepe-Chr8:59969002 0.0 dispersed
Hepe08g2119 Hepe-Chr8:59969002 Hepe09g0469 Hepe-Chr9:4317416 0.0 dispersed
Hepe08g2119 Hepe-Chr8:59969002 Hepe10g0315 Hepe-Chr10:3363824 0.0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2119 K01535 - csv:101221564 1763.43