Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2123 ATGGCTGCTGATTCTTCCTCCTTTGATGGTGCTCTTTTCGACTCGCCAAAATGTAGTAAGTTGACTATGCAAGAGAAGAGAGAACTTGTATATGAAATTTCAAAGTCACATGGTGCAAGTGAGACACTGCAATCATGGAGCCGTCAAGACATTCTACAAGTTCTGTGTGCAGAGATGGGGAAAGAAAGAAAATATACTGGCTTGACAAAGCAGAAAATAATAGAGCATCTTTTGAGACTAGTATCCGAAAAGAAGGCATTGCTGCCTGAGGTTTTGAAAAACCTTGAGCCACAGTCTTCTGCAGGTGGCCATAAAACTACCAAAAGGCAGAGGAAATCTGATCATCCAGCTCAGCTTTCTGTTCCTACAAGCGACTTTTCGACCAGTAGTTCTCATTATGAGTCTGGTCATACGGCATGCTGCAAAAATTTGGCTTGTCGAGCGACGCTAAATCCAGAAGATGCATTTTGTAGAAGGTGTTCATGTTGCATTTGTCGACAGTATGATGACAACAAGGATCCTAGCTTGTGGATAAGTTGCAGCGCGGAGCCTCCATTTCAAGGTGATTCTTGCAACATGTCATGTCATCTTGAATGTGCTTTAAAAGATGAAAGATCAGGAATTTCGAAAGTCGGACAAAGCAGGGGAGTTGATGGGAGCTTCTACTGTGTGTCTTGTGGGAAATTAAATGATTTGCTTGGTTGCTGCAGAAAACAACTAGTTCATGCAAAAGATACGAGAAGGGTCGACATACTATGTTATCGTGTCTCTTTGAGCCAAAAGCTTCTCCATGGAACTGAAAAGTATAAAGTGCTTTATCAGATTGTCAATGACGCAGTGAGGAAGCTTGAAGCTGAAGTGGGACCAATAGCCGGTGTACCAGTAAAGATGGGTAGAGGTATCGTAAACAGGCTTTCGTCGGGACCCGAAGTTCAAAAACTCTGTGCTTCTGCTATTGAGTTACTGGACTCAATGCTCTCCAGCAAATCCTTGCATCTTTCACCTAATCCCGACATACAAGATGAAAATTTTGTTCCTGAAAACATGGTTAGAGTCGAAGATGTTCGGTCAACATCCCTCACTCTGGTTTTGAGTTGTGAATGTGGGTCTTCTGAGAACCAGGTCGGCTTCACCTTATGGCATCGTAAGGCAGACGATGCAGATTATCCGACAGAGCCAACGTGCATTCTACGACAACAGAAGGCGAGGTTTGTTGCGATGGGACTATCACCTGCTACTGAATATCATTTCAAAATTGTTCTGTTTGAGGGGACAAGAGAGTTGAGGAAATTTGAAGTTCTGTTCTCAACAATTAGGGAGGTACAAGAGAACCCAGGCTGCTTAGAAATTGAGAGAAGCCAAAGCCACGCAACCAACTGTAGTGACCTTTCTAATCCTTCCTCGGTCGAAGACGAAACTACCGACATTCTTCCCTATGGCGATCGAGCCGATAACCTAGGAAAAAACTCCACTGCCTATTCGAAGGGCACCAAAATGCTTTCCTCGGCTATTTTATCGACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACGCCTGCAGGTATAGTTTCTGAGCTGGATGAGGCAAATGCTGCAGGAATGGTTGGTTTGATCCCCAACTCTGTTGGATCAAAGCTGGAGAACAAGCATGGACCACCAGCGCCAAAACTCAACACCGATAATCCGTTAAGTGCCCTTGTCCGGTCTGGAATGGGGCGCGAGCCATTCGTTGGCTGTTCTGAAGATGGCTTGCCTATTACTCCCTGCAAGCTTGAAGTGCTTAAGGATAGTCTTGGTAGGGGTGAGAGACTGAAATCCAGCTGCAAGGACCTCGACAACAGGACTCGAAAAGGAGGGGAACCCCAAGACGGTGGCACATCAAAGATGCGAACTGGGGAAAGGCAGGACGACAAATGTGCTGAAAATGGTGTTTCGGATCGGGATTTCGAGCACTATGTGAAGGTAATTAGATGGTTAGAGTGTGAGGGACATATCGAAAAGAATTTCAGGCAGAAGTTTCTCACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTGAAGGTGTTTGTTGATACTTTTATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTAGATACTTTTTCAGAAAGCATTTCGAGCAAAAAACCTACGACTACGCCGCCCGGGTTCTGCATGAAGCTGTGGCACTGA 2208 44.88 MAADSSSFDGALFDSPKCSKLTMQEKRELVYEISKSHGASETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLVSEKKALLPEVLKNLEPQSSAGGHKTTKRQRKSDHPAQLSVPTSDFSTSSSHYESGHTACCKNLACRATLNPEDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGISKVGQSRGVDGSFYCVSCGKLNDLLGCCRKQLVHAKDTRRVDILCYRVSLSQKLLHGTEKYKVLYQIVNDAVRKLEAEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIELLDSMLSSKSLHLSPNPDIQDENFVPENMVRVEDVRSTSLTLVLSCECGSSENQVGFTLWHRKADDADYPTEPTCILRQQKARFVAMGLSPATEYHFKIVLFEGTRELRKFEVLFSTIREVQENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRADNLGKNSTAYSKGTKMLSSAILSTDAFNLSDNGEEGTPAGIVSELDEANAAGMVGLIPNSVGSKLENKHGPPAPKLNTDNPLSALVRSGMGREPFVGCSEDGLPITPCKLEVLKDSLGRGERLKSSCKDLDNRTRKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSESISSKKPTTTPPGFCMKLWH 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 60153960 60159419 - Hsped.08g21230.1 Hepe08g2123 578095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2123 735 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 735 IPR044514 GO:0010048(InterPro)|GO:0040029(InterPro)
Hepe08g2123 735 Pfam PHD - plant homeodomain finger protein 141 261 IPR032881 -
Hepe08g2123 735 MobiDBLite consensus disorder prediction 97 128 - -
Hepe08g2123 735 MobiDBLite consensus disorder prediction 608 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2123 Hepe-Chr8:60153960 Hepe09g0742 Hepe-Chr9:7100874 7.05e-111 dispersed
Hepe10g0437 Hepe-Chr10:4929430 Hepe08g2123 Hepe-Chr8:60153960 7.62e-129 transposed
Hepe08g2123 Hepe-Chr8:60153960 Hepe09g0475 Hepe-Chr9:4371087 1.35e-288 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2123 - - - 0.0