Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2171 ATGAGTTTGGTTGAAGAATATTTGCCAGTGATGGCGATGCTTGGGATCCAAGTGACTTACGCAGTTGTGACTCTCATCTCCCGAGCTGCCCTTTTGAAGGGTATGAGTCCTAGAGTTTTCGTTGTTTATAGGCAGGCTGTTGCCACTCTCTTTATTTCACCCATTGCTTATTTCTCCAGGTCAAAATCCATGAGGGTATCCTTGGACTTGAGGAGCTTTTATGTGATCTTCCTTGCTTCTCTTGTCGGCTCGTCAATGGCGACGGCAATGGCGAATCTGATTCCGGCGGTGACGTTTGTGATAGCAGTAATTGTTGGAATGGAAAGTGTGAAAATGAGAAGCTTGAGGAGCATAGCAAAGATTGGAGGGACAGTGGTTTGTGTGAGTGGAGCCATGTGCATGGCTCTTCTAAGGGGTCCAAAGCTTTTGAATGGCACACAAGGTTTAGGGGTGAAATTTGCAATATTTGGTGTGGAAAGTGAAAGTCACAATGCTTGGTTATTGGGTTGTTTGTATCTCTTTGGGGGCTGCTGTTGCTGGTCAATTTGGTTGATTTTGCAGGTACCAGCAATAGCAAGATATCCAGACAAACTATCTTTATCAGCATGGATGTGTTTTTTTTCGACGATACAATCGATCATTGTCACTCTATTAGTAGAGGGAACTAATAGAGAAACATGGAAAATACATTCAAGTATTGAAGTTATTTGTTACCTCTTCTCAGGAATTTTTGGGTCAGGTGTTGCCTACTTTGTTCAAGCTTGGTGTATTTCAAAAAGAGGCCCTGTATTCTCTGCAGTGTTCAATCCTCTTTGCACCATTATGACAACTATTTTTGCAGCTATATTTCTTCATGAGGAGATTTATACCGGAAGCTTGTTGGGGGGCGTGACTGTAATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAAAGATTATGGGAAGGAAAAAGGAACAGAAAAGCTAAGTGTTGAAAAACAAGAAGAGGATTGTGAATCGACTTCAGTTGATTTGGAGGAACCCCTTTTATCTAAAGAATGTATACATGGTATTGACAACTAG 1065 41.41 MSLVEEYLPVMAMLGIQVTYAVVTLISRAALLKGMSPRVFVVYRQAVATLFISPIAYFSRSKSMRVSLDLRSFYVIFLASLVGSSMATAMANLIPAVTFVIAVIVGMESVKMRSLRSIAKIGGTVVCVSGAMCMALLRGPKLLNGTQGLGVKFAIFGVESESHNAWLLGCLYLFGGCCCWSIWLILQVPAIARYPDKLSLSAWMCFFSTIQSIIVTLLVEGTNRETWKIHSSIEVICYLFSGIFGSGVAYFVQAWCISKRGPVFSAVFNPLCTIMTTIFAAIFLHEEIYTGSLLGGVTVIIGLYIVLWGKAKDYGKEKGTEKLSVEKQEEDCESTSVDLEEPLLSKECIHGIDN 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 61122661 61127268 - Hsped.08g21710.1 Hepe08g2171 578143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2171 354 PANTHER WAT1-RELATED PROTEIN 11 326 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe08g2171 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 204 311 - -
Hepe08g2171 354 Pfam EamA-like transporter family 168 307 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2171 Hepe-Chr8:61122661 Hepe08g2173 Hepe-Chr8:61177736 5.57e-201 dispersed
Hepe08g2171 Hepe-Chr8:61122661 Hepe08g2172 Hepe-Chr8:61133765 2.59e-195 tandem
Hepe08g2171 Hepe-Chr8:61122661 Hepe09g0531 Hepe-Chr9:5017956 6.38e-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2171 - - - 0.0