Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2172 ATGGGTTTTGTTGAAGAATATTTGCCTGCAATGGCTATGTTTGGGCTTCAAGTGACCTACGCCGTAATGGCTCTCATCTCCCGAGCTGCCCTCTTGAAGGGTATGAGCCCTAGAGTCTTCGTTGTTTACAGGCAGGCTATTGCCACTCTCTTTATTGCACCCATTGCTTATTTCTCCAGGTCGAAATCCAGGAGGTTTTCTTTGGACTTGAAGAGCTTTTCTTTGATCTTTCTTGCTGCTTTTGTCGGTGCAACGATGAACCAAAATGTTTACTTTGAGGGAGTTTTTTTAGCTAGCTCGTCACTGGCGACCGCGATGGCAAATTTGACTCCGGCGGTGACGTTTGTGATAGCGGCAATTGTCGGAATGGAGAATGTGAAGTTGAGAAGCTTGAGGAGCATGGCAAAGATTGGAGGGACAGTGGTTTGTGTGAGTGGGGCGATGTGCATGGCTCTTCTAAGGGGTCCAAAGCTTCTGAATGGCACACAAGGTTTAGAGGTGAAATCTGCAATATTATTTGGTGTGGAAAGTGAAAGTCACAATGCTTGGTTATTGGGTTGCTTGTGTCTCTTTGGGAGCTGTTGTTGCTGGTCAGTTTGGTTGATTTTGCAGGTACCGGCATCAAAATGCTATCCTGACAACTTATCTTTATCAGCATGGATGTGCTTCTTTGCCACAATTCAATCCATTATTGTTACTCTATTGGTAGAGCCAATGAATCTAGAAACATGGAAAATACATTCAAATATTGAAGTTATTTGTTACCTCTTCTCAGGAATTGTTGGGTCAGGCATTGCCTTCTTTGTTCAAGCATGGTGTGTTTCCCAAAGGGGCCCTGTCTACTCTGCAATGTTCAATCCTCTTTGCACCATTCTTACAACTATTTTGGCAGCTATACTTCTTCATGAGCAGATTTTTACTGGAAGCTTGTTGGGGGGCGTTGTTGTAATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAAAGATTATGTGAAGGAAGAAGGAGGCACAGAAAATCAAAGTGTTGAAAAAGAAGAAGAGGATTGTGAATCAGCTTCAGCTGAGACAAGCCTACGTAAAATTTATTTGGAGGAACCTCTTTTGTCTAAAGAATTTAAAGGAAAAAAGCAAGAAATAAATGAGGAGGAGTAA 1155 42.25 MGFVEEYLPAMAMFGLQVTYAVMALISRAALLKGMSPRVFVVYRQAIATLFIAPIAYFSRSKSRRFSLDLKSFSLIFLAAFVGATMNQNVYFEGVFLASSSLATAMANLTPAVTFVIAAIVGMENVKLRSLRSMAKIGGTVVCVSGAMCMALLRGPKLLNGTQGLEVKSAILFGVESESHNAWLLGCLCLFGSCCCWSVWLILQVPASKCYPDNLSLSAWMCFFATIQSIIVTLLVEPMNLETWKIHSNIEVICYLFSGIVGSGIAFFVQAWCVSQRGPVYSAMFNPLCTILTTILAAILLHEQIFTGSLLGGVVVIIGLYIVLWGKAKDYVKEEGGTENQSVEKEEEDCESASAETSLRKIYLEEPLLSKEFKGKKQEINEEE 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 61133765 61158267 - Hsped.08g21720.1 Hepe08g2172 578144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2172 384 MobiDBLite consensus disorder prediction 336 355 - -
Hepe08g2172 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Hepe08g2172 384 Pfam EamA-like transporter family 12 135 IPR000620 GO:0016020(InterPro)
Hepe08g2172 384 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020(InterPro)
Hepe08g2172 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 328 - -
Hepe08g2172 384 PANTHER WAT1-RELATED PROTEIN 11 345 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2172 Hepe-Chr8:61133765 Hepe09g0531 Hepe-Chr9:5017956 6.49e-116 dispersed
Hepe10g0555 Hepe-Chr10:6615732 Hepe08g2172 Hepe-Chr8:61133765 8.81e-07 dispersed
Hepe08g2171 Hepe-Chr8:61122661 Hepe08g2172 Hepe-Chr8:61133765 2.59e-195 tandem
Hepe08g2172 Hepe-Chr8:61133765 Hepe08g2173 Hepe-Chr8:61177736 1.42e-234 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2172 - - - 0.0