Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2173 ATGGGTTTTATTGAAGAATATTTGCCTGCAATGGCTATGTTTGGGCTTCAAGTGACCTACGCCGTAATGGCTCTCATCTCTCGAGCTGCCCTCTTGAAGGGTATGAGCCCTAGAGTCTTCGTTGTTTATAGGCAGGCTATTGCTACTCTCTTTATTGCACCCATTGCTTATTTCTCCAGGTCGAAATCCAGGAGGGTGTCTTTGGACTTGAAGAGCTTTTCTTTGATCTTCCTTGCTGCTTTTGTCGGTGCAACGATGAACCAAAATGTTTACTTTGAGGGAGTTTTCTTAGCTAGCTCGTCAATGGCGACTGCGATGACGAATTTGATTCCAGCGGTGACGTTTGTAATAGCGGCAATTGTCGGAATGGAGAATGTGAAGTTGAGAAGCTTGAGGAGCATTGCAAAGATTGGAGGGACTGTGGTTTGTGTGAGTGGGGCCATGTGTATGGCTCTTCTAAGGGGTCCAAAGCTTCTTAATGACACACAAGGTTTAGGGGTGAAATCTGCAATATTTGGTGTGGAAAGTGAAAGTCACAATGCTTGGTTATTGGGTTGCTTGTGTCTCTTTGGCAGCTGTTGTTGCTGGTCAGTTTGGTTGATTTTGCAGGTACCGGCGTCAAAATGCTATCCCGACAACTTGTCTTTATCAGCATGGATGTGTTTGTTTGCCACAATTCAATCCCTCATTGTTACTCTATTGGTAGAGCCAATGAATCTAGAAACATGGAAAATACATTCAAATATTGAAGTTATTTGTTACCTCTTCTCAGGAATTGTTGGGTCAGGCATTGCCTTCTTTGTTCAAGCATGGTGTGTTTCACAAAGGGGCCCTGTCTACTCTGCAATGTTCAATCCTCTTTGCACCATTCTTACAACTATTTTAGCAGCTATACTTCTTCATGAGGAGATTTTTACTGGAAGCTTGTTGGGTGGCGTGGCTGTAATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAAGGATTATGTGAATGAACAAAGTACAAGTGTTGAAAAACAAGAAGAAGATTGTGAATCAGCGGAGACAAGTAGCTGTAAAAGTGATTTTGAGGAACCTCTTTTGTCCAAAGCATGCATACATCATATTGACAACTAG 1119 42.27 MGFIEEYLPAMAMFGLQVTYAVMALISRAALLKGMSPRVFVVYRQAIATLFIAPIAYFSRSKSRRVSLDLKSFSLIFLAAFVGATMNQNVYFEGVFLASSSMATAMTNLIPAVTFVIAAIVGMENVKLRSLRSIAKIGGTVVCVSGAMCMALLRGPKLLNDTQGLGVKSAIFGVESESHNAWLLGCLCLFGSCCCWSVWLILQVPASKCYPDNLSLSAWMCLFATIQSLIVTLLVEPMNLETWKIHSNIEVICYLFSGIVGSGIAFFVQAWCVSQRGPVYSAMFNPLCTILTTILAAILLHEEIFTGSLLGGVAVIIGLYIVLWGKAKDYVNEQSTSVEKQEEDCESAETSSCKSDFEEPLLSKACIHHIDN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 61177736 61181248 - Hsped.08g21730.1 Hepe08g2173 578145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2173 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 327 - -
Hepe08g2173 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Hepe08g2173 372 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe08g2173 372 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020(InterPro)
Hepe08g2173 372 Pfam EamA-like transporter family 12 143 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2171 Hepe-Chr8:61122661 Hepe08g2173 Hepe-Chr8:61177736 5.57e-201 dispersed
Hepe08g2173 Hepe-Chr8:61177736 Hepe09g0531 Hepe-Chr9:5017956 4.00e-119 dispersed
Hepe08g2172 Hepe-Chr8:61133765 Hepe08g2173 Hepe-Chr8:61177736 1.42e-234 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2173 - - - 0.0