Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2232 ATGGTCAATGATCTAAACCAAGAGCTGTCAAAGAAAACAATCATATTTGGTCTAAAAGTTTGGGAAGTGATTGGAATTGGAGTAGGTTTATTCATAATCTCAATCCTCTGCATTCTCTCACTCTGCTTAAGCTCACACAACAAGAAGTCAAAAAAATCCTCAGCCACAAAAATCCCATCTCATTCAAAGGACATAAAGGCAATTCACATAACCACCACTCACAAAAAACCAACAACAATTCAAAAATTGGACAACAACAACAACAACAATTACAGCAGTGAATCAGGATTATCATTATTTCATCCATTCAGCTATGGCTATGGATCACAGTCAGGGGATGAAGGCGGCAGCAGCTCGGGCACCGTCACCACGACAATGTACCGACGTTCGACGTCACCAACAACGACGACGGTTCCTTCGCCGCTGTCGGGGATGCCGGAGATGTCGCAATTGGGGTGGGGGTATTGGTTTACTTTGAGGGAGCTAGATTTGGCCACCAATTTGTTCTCAGAGGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTATAGAGGGTGCTTGTTGAATGGGACAGCAGTGGCAGTTAAGAAGATTTTTAATGGGCAAGGCCAAGCAGAGAAGGAATTCAGAGCGGAAGTTGAGGCAATTGGGCATGTCAGACATAAGAATCTTGTTCGTCTTTTGGGATATTGCATTGAAGGGACTCATAGGATGCTGGTTTATGAGTATATAAACAATGGAAGCTTAGAGCTGTGGCTACATGGAGGCATGGGAGATAATAGATATCTTACATGGGAGGCTCGAATGAAGATCATGGTAGGGACAGCCAAAGGACTTGCATACTTGCACGAAGCCATTGAGCCAAAGGTCGTACATCGAGACATCAAGGCGAGCAACATACTCATAGATGAAAATTTCAATGCCAAAGTATCAGATTTTGGGCTGGCAAAGTTGATGCATGCTGGGAAGACTCATGTTACAACACGAGTTATGGGGACATTTGGATATGTCGCTCCAGAATACGCAAATACGGGACTTTTGAATGAGAAGAGCGATGTGTATAGTTTTGGAGTTGTGCTGGTGGAGACAATCACCGGAAGAGATCCAGTGGACTATGGACGCCCGTCTAAGCAGGTGAATGTGGTGGATTGGTTGAAAATGATGATTGGAAGTAGAAGATGTGAAGAAGTGGTGGACCCAAAAATAGGGGTTGGAGGAAGGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCTTTGAGTTGTGTGGATCCTGATTATGACAAGAGACCAAAGATGAGCCAAGTTGTTCGAATGCTTGAATCTCAAGATAATAATAATTCTTCTCATACACGTTCTACTACTTAG 1374 43.52 MVNDLNQELSKKTIIFGLKVWEVIGIGVGLFIISILCILSLCLSSHNKKSKKSSATKIPSHSKDIKAIHITTTHKKPTTIQKLDNNNNNNYSSESGLSLFHPFSYGYGSQSGDEGGSSSGTVTTTMYRRSTSPTTTTVPSPLSGMPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVYRGCLLNGTAVAVKKIFNGQGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHGGMGDNRYLTWEARMKIMVGTAKGLAYLHEAIEPKVVHRDIKASNILIDENFNAKVSDFGLAKLMHAGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPSKQVNVVDWLKMMIGSRRCEEVVDPKIGVGGRPSTRGLKRVLLVALSCVDPDYDKRPKMSQVVRMLESQDNNNSSHTRSTT 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 62070809 62076028 + Hsped.08g22320.1 Hepe08g2232 578204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2232 457 ProSitePatterns Protein kinases ATP-binding region signature. 175 198 IPR017441 GO:0005524(InterPro)
Hepe08g2232 457 FunFam Putative receptor-like serine/threonine-protein kinase 245 457 - -
Hepe08g2232 457 FunFam serine/threonine-protein kinase PBS1-like 143 244 - -
Hepe08g2232 457 SMART serkin_6 169 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2232 457 Pfam Protein kinase domain 170 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2232 457 CDD STKc_IRAK 175 443 - -
Hepe08g2232 457 Gene3D Phosphorylase Kinase; domain 1 147 244 - -
Hepe08g2232 457 SUPERFAMILY Protein kinase-like (PK-like) 143 445 IPR011009 -
Hepe08g2232 457 ProSiteProfiles Protein kinase domain profile. 169 455 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2232 457 PANTHER OS01G0323000 PROTEIN 1 451 IPR052232 -
Hepe08g2232 457 Gene3D Transferase(Phosphotransferase) domain 1 245 456 - -
Hepe08g2232 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1016 Hepe-Chr7:14323610 Hepe08g2232 Hepe-Chr8:62070809 7.96e-78 dispersed
Hepe08g1295 Hepe-Chr8:14484578 Hepe08g2232 Hepe-Chr8:62070809 5.72e-156 dispersed
Hepe08g2232 Hepe-Chr8:62070809 Hepe10g1850 Hepe-Chr10:55220573 1.42e-91 dispersed
Hepe03g0012 Hepe-Chr3:157791 Hepe08g2232 Hepe-Chr8:62070809 1.35e-167 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73080 PF00069 Pkinase 1.00E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2232 - - - 0.0