Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g2232 | ATGGTCAATGATCTAAACCAAGAGCTGTCAAAGAAAACAATCATATTTGGTCTAAAAGTTTGGGAAGTGATTGGAATTGGAGTAGGTTTATTCATAATCTCAATCCTCTGCATTCTCTCACTCTGCTTAAGCTCACACAACAAGAAGTCAAAAAAATCCTCAGCCACAAAAATCCCATCTCATTCAAAGGACATAAAGGCAATTCACATAACCACCACTCACAAAAAACCAACAACAATTCAAAAATTGGACAACAACAACAACAACAATTACAGCAGTGAATCAGGATTATCATTATTTCATCCATTCAGCTATGGCTATGGATCACAGTCAGGGGATGAAGGCGGCAGCAGCTCGGGCACCGTCACCACGACAATGTACCGACGTTCGACGTCACCAACAACGACGACGGTTCCTTCGCCGCTGTCGGGGATGCCGGAGATGTCGCAATTGGGGTGGGGGTATTGGTTTACTTTGAGGGAGCTAGATTTGGCCACCAATTTGTTCTCAGAGGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTATAGAGGGTGCTTGTTGAATGGGACAGCAGTGGCAGTTAAGAAGATTTTTAATGGGCAAGGCCAAGCAGAGAAGGAATTCAGAGCGGAAGTTGAGGCAATTGGGCATGTCAGACATAAGAATCTTGTTCGTCTTTTGGGATATTGCATTGAAGGGACTCATAGGATGCTGGTTTATGAGTATATAAACAATGGAAGCTTAGAGCTGTGGCTACATGGAGGCATGGGAGATAATAGATATCTTACATGGGAGGCTCGAATGAAGATCATGGTAGGGACAGCCAAAGGACTTGCATACTTGCACGAAGCCATTGAGCCAAAGGTCGTACATCGAGACATCAAGGCGAGCAACATACTCATAGATGAAAATTTCAATGCCAAAGTATCAGATTTTGGGCTGGCAAAGTTGATGCATGCTGGGAAGACTCATGTTACAACACGAGTTATGGGGACATTTGGATATGTCGCTCCAGAATACGCAAATACGGGACTTTTGAATGAGAAGAGCGATGTGTATAGTTTTGGAGTTGTGCTGGTGGAGACAATCACCGGAAGAGATCCAGTGGACTATGGACGCCCGTCTAAGCAGGTGAATGTGGTGGATTGGTTGAAAATGATGATTGGAAGTAGAAGATGTGAAGAAGTGGTGGACCCAAAAATAGGGGTTGGAGGAAGGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCTTTGAGTTGTGTGGATCCTGATTATGACAAGAGACCAAAGATGAGCCAAGTTGTTCGAATGCTTGAATCTCAAGATAATAATAATTCTTCTCATACACGTTCTACTACTTAG | 1374 | 43.52 | MVNDLNQELSKKTIIFGLKVWEVIGIGVGLFIISILCILSLCLSSHNKKSKKSSATKIPSHSKDIKAIHITTTHKKPTTIQKLDNNNNNNYSSESGLSLFHPFSYGYGSQSGDEGGSSSGTVTTTMYRRSTSPTTTTVPSPLSGMPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVYRGCLLNGTAVAVKKIFNGQGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHGGMGDNRYLTWEARMKIMVGTAKGLAYLHEAIEPKVVHRDIKASNILIDENFNAKVSDFGLAKLMHAGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPSKQVNVVDWLKMMIGSRRCEEVVDPKIGVGGRPSTRGLKRVLLVALSCVDPDYDKRPKMSQVVRMLESQDNNNSSHTRSTT | 457 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 62070809 | 62076028 | + | Hsped.08g22320.1 | Hepe08g2232 | 578204 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g2232 | 457 | ProSitePatterns | Protein kinases ATP-binding region signature. | 175 | 198 | IPR017441 | GO:0005524(InterPro) | |
Hepe08g2232 | 457 | FunFam | Putative receptor-like serine/threonine-protein kinase | 245 | 457 | - | - | |
Hepe08g2232 | 457 | FunFam | serine/threonine-protein kinase PBS1-like | 143 | 244 | - | - | |
Hepe08g2232 | 457 | SMART | serkin_6 | 169 | 442 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2232 | 457 | Pfam | Protein kinase domain | 170 | 439 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2232 | 457 | CDD | STKc_IRAK | 175 | 443 | - | - | |
Hepe08g2232 | 457 | Gene3D | Phosphorylase Kinase; domain 1 | 147 | 244 | - | - | |
Hepe08g2232 | 457 | SUPERFAMILY | Protein kinase-like (PK-like) | 143 | 445 | IPR011009 | - | |
Hepe08g2232 | 457 | ProSiteProfiles | Protein kinase domain profile. | 169 | 455 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe08g2232 | 457 | PANTHER | OS01G0323000 PROTEIN | 1 | 451 | IPR052232 | - | |
Hepe08g2232 | 457 | Gene3D | Transferase(Phosphotransferase) domain 1 | 245 | 456 | - | - | |
Hepe08g2232 | 457 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 291 | 303 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g1016 | Hepe-Chr7:14323610 | Hepe08g2232 | Hepe-Chr8:62070809 | 7.96e-78 | dispersed | |
Hepe08g1295 | Hepe-Chr8:14484578 | Hepe08g2232 | Hepe-Chr8:62070809 | 5.72e-156 | dispersed | |
Hepe08g2232 | Hepe-Chr8:62070809 | Hepe10g1850 | Hepe-Chr10:55220573 | 1.42e-91 | dispersed | |
Hepe03g0012 | Hepe-Chr3:157791 | Hepe08g2232 | Hepe-Chr8:62070809 | 1.35e-167 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73080 | PF00069 | Pkinase | 1.00E-48 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g2232 | - | - | - | 0.0 |