Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2237 ATGGTGGGAGATAATATTACAGCAATCTTTGGGATGATTGTGTTGCAAATTTGCTACGCTGGTTTAAACATTATCTCAAAGCTCGCCATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTACAGACAGCTCTTTGGAACTTTGGCCATTGTTCCTTTTGCTTTTTTCACTGAAAGGAAAACGAGGCCAAAGATTACTTTTCCAGTTCTGATTCAAATCTTGATGTGTTCTTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTTGGGTTGAAGTATACAAACCCAACAGTTTCAAGTGCTATGACCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGCCTGGTTTTGCAAAGGTAACAGGGACAATTGTGTGTGTATGTGGGGCAATGTTGCTGTCTTTCTACCATGGACACACCATTGACTTAGGTGAATCCAAAATTCTCTGGCCATATGCTCAAAGAATGAGTGAAACTAACCCGAACCGTAAACAACACCACGTCCTCGGCTCGATTTTGTTGCTCTGCAGCTCTTTTGCTTGGGCGTTATGGTTCGTGATCCAAGCAAGATTGAGTGTCAAGTTTAAAGCTCCCTATACAAGTACAGCATTGTTGTGCTTCATGTCCTTTTTCCAATGTGGACTCATAGCTGTGATATCAGAGCACAACATTGCTGCTTGGTCTTTGAAAAGTACGATTCGACTCGTCACAGCTCTTTACACGGGAGTTGTGTGCTCTGGATTGACATTTAGCATCACTTCATGGATTATACAGAGGAAAGGTCCTCTCTATGTCTCCATTTTCACCCCTTTATTGCTTATCATTGTAGCCATCCTCACCTGGGCTGTCCTCGGCCAACAACTCTACGTCGGAACTGTTATTGGTTCTGTTTTGATCATCATTGGGCTCTATTCTGTGCTATGGGGAAAGTCCAAAGAGATGAAAGAAGTAGAAGATGAGAAGATGGAAAAGCCAACAATAGAGAAGCTGCCAAATGGGAGTCATAATATTGATGAGAAAGATGACATGGAATTGCAAATCACAAACATCAAATGA 1101 41.6 MVGDNITAIFGMIVLQICYAGLNIISKLAMQSGMNPLVLLTYRQLFGTLAIVPFAFFTERKTRPKITFPVLIQILMCSLSGATGNQIFFFVGLKYTNPTVSSAMTNVLPAATFILAVLFRQESVRIKTKPGFAKVTGTIVCVCGAMLLSFYHGHTIDLGESKILWPYAQRMSETNPNRKQHHVLGSILLLCSSFAWALWFVIQARLSVKFKAPYTSTALLCFMSFFQCGLIAVISEHNIAAWSLKSTIRLVTALYTGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAILTWAVLGQQLYVGTVIGSVLIIIGLYSVLWGKSKEMKEVEDEKMEKPTIEKLPNGSHNIDEKDDMELQITNIK 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 62108439 62111879 + Hsped.08g22370.1 Hepe08g2237 578209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2237 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 152 - -
Hepe08g2237 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 327 - -
Hepe08g2237 366 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020(InterPro)
Hepe08g2237 366 Pfam EamA-like transporter family 8 149 IPR000620 GO:0016020(InterPro)
Hepe08g2237 366 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0662 Hepe-Chr5:10907759 Hepe08g2237 Hepe-Chr8:62108439 2.09e-76 dispersed
Hepe06g1675 Hepe-Chr6:67784583 Hepe08g2237 Hepe-Chr8:62108439 9.22e-12 dispersed
Hepe07g0017 Hepe-Chr7:305615 Hepe08g2237 Hepe-Chr8:62108439 1.26e-60 dispersed
Hepe07g1728 Hepe-Chr7:59299644 Hepe08g2237 Hepe-Chr8:62108439 2.30e-67 dispersed
Hepe08g2237 Hepe-Chr8:62108439 Hepe09g0368 Hepe-Chr9:3248696 5.93e-76 dispersed
Hepe08g2237 Hepe-Chr8:62108439 Hepe09g1751 Hepe-Chr9:54690040 2.84e-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2237 - - - 0.0