Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2285 ATGGGGCATTTCTCCACCATGTTCAATGGGTTGGCAAGGTCATTTTCCTTCAAGAAAGGTAGAAATTCCGGGAGTCTAAGTGATGAGGGAGGGCGAGAAGCTGCAAAAGCCATGATAAAGGATGCGAAAAAGAAAGACTCGATATTATGTTCCTCTGGTGTACTCAATGCAGAAGGTTCGGATAGTTTTGCTTCGGTGTTTTCGAAAAAAGGCGAAAAAGGAGTAAACCAAGATTGCTGCATTGTCTGGGAGGAATTCGGATGCCAAGAAGACATGATGTTCTGTGGGATTTTCGATGGGCACGGACCGTGGGGTCATTTTGTTGCGAAGACGGTAAGAGAATCAATGCCGCCCTCATTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTTCTTGACCCAGAATTGGATTCAGAAAAGAAGCATCAGCGATTCGATTTATGGAAGCATTCCTATTTAAGAGCTTGTGCTGCCATCGATCACGAACTTGAGCGGCACCGTAAAATCGATACATTTTACAGTGGAACAACTGCCCTGTCCATTGTTAAACAGGGTGAACTAGTGGTTGTGGCCAACGTTGGTGACTCCCGAGCGGTTTTGGCTACTACTTCAGATGATGGAAGTGTAGTACCGGTTCAGCTCACCGTTGATTTCAAACCAAACCTACCTCAGGAGGCGGAGCGGATAATTCAATGCAACGGGAGGGTGTTTTGTTTAAGTGACGAGCCGGGAGTTCATAGGGTTTGGCTTCCCAACGAGGAATCACCCGGATTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGATTTTGGACTAATCTCTATGCCAGAAGTGACACATAGAAGCATAACTAGCAGAGACCAATTCATTATATTAGCAACTGATGGGGTATGGGATGTTGTCACGAACCAAGAAGCAGTGGAGATTGTATCAACAACACCAGATAGAGCGAAAGCAGCGAAACGTCTGGTCCAGTGTGCGGTTCGGGCGTGGAAACGGAAGAGACGGGGCATTGCAATGGATGATATATCAGCTATCTGCCTCTTCTTCCACTCCTCATCAGAGGAAGAAGATCACACACCATAG 1095 46.58 MGHFSTMFNGLARSFSFKKGRNSGSLSDEGGREAAKAMIKDAKKKDSILCSSGVLNAEGSDSFASVFSKKGEKGVNQDCCIVWEEFGCQEDMMFCGIFDGHGPWGHFVAKTVRESMPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDLWKHSYLRACAAIDHELERHRKIDTFYSGTTALSIVKQGELVVVANVGDSRAVLATTSDDGSVVPVQLTVDFKPNLPQEAERIIQCNGRVFCLSDEPGVHRVWLPNEESPGLAMSRAFGDYCIKDFGLISMPEVTHRSITSRDQFIILATDGVWDVVTNQEAVEIVSTTPDRAKAAKRLVQCAVRAWKRKRRGIAMDDISAICLFFHSSSEEEDHTP 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 62599518 62602835 - Hsped.08g22850.1 Hepe08g2285 578257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2285 364 SMART PP2C_4 52 351 IPR001932 -
Hepe08g2285 364 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
Hepe08g2285 364 SUPERFAMILY PP2C-like 62 354 IPR036457 -
Hepe08g2285 364 FunFam Probable protein phosphatase 2C 34 54 355 - -
Hepe08g2285 364 Pfam Protein phosphatase 2C 87 332 IPR001932 -
Hepe08g2285 364 CDD PP2Cc 63 353 IPR001932 -
Hepe08g2285 364 PANTHER PROTEIN PHOSPHATASE 46 352 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe08g2285 364 Gene3D - 51 356 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1888 Hepe-Chr8:48728316 Hepe08g2285 Hepe-Chr8:62599518 7.70e-115 dispersed
Hepe08g2285 Hepe-Chr8:62599518 Hepe09g1273 Hepe-Chr9:17359646 6.34e-105 dispersed
Hepe03g0077 Hepe-Chr3:903844 Hepe08g2285 Hepe-Chr8:62599518 4.63e-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2285 - - - 0.0