Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2288 ATGTCGACGGAGAGACTGATTCCTAGTGATACGGTTCCGTCGGAAGCAGAGCCGCCAAAGTTGGCTTCAGCGCCGCCTTCGTTCCGGCAATGTGGAGAACTGGCTAGGGTTTTTGAGGAGCTTCCGATTGCTTCCATTGTATCGGTTTCCCGGCCGGAAACTGGAGATATTAGCCCCTTGCTGTTATCTTACACCATTGAAATCCAATACAAACAGTTTAAATGGAGCTTAGTGAAGAAAGCTTCTCAAGTTCTATATTTACATTTTGCATTGAAGAGACGCGCATTTATCGAAGAACTTCACGAGAAACAAGAGCAGGTGAAAGAATGGCTTCACAACTTGGGAATAGTAGACCATACAGCAGTAGTTCATCATGATGACGAGTCTGATGATGGGGCTTTTTCTTTGCATGATGAACAAACTACAAGAAACAGGAACGTCCCTTCTGTTGCTGCTTTACCCATCATTAAGCCAGCACTGGGAGGACAGCGGTCCATTTCAGACAAGGCAAAGCTAGCAATGCAGGGTTACTTAAATCATTTTTTTGGGAACTTGGATATTGTAAATTCTCGTGAGGTCTGCAAATTTTTAGAAGTCTCCAAGATGTCATTTGTGAGAGAATACGGTCCAAAGTTGAAAGAAGGTTACCTAATGGTGAAGCATTTAAAACAACTCACCGGATCTGATTCTAGTATAAAATGTTTTGCATGTCATTGGTGCAGTTGCTGCGAATACAATTGGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTGGCCTTGGTTGCTGATCCTATGGACACTAAACTCCTAGATATAATCGTTTTTGATGTGCTACCAACATTAGAAGAAAAGGAGGGATCCCAAGCATGCTTAGCGTATCATGTCAAGGAGCGCAATCCTTTACGTTATTCGTTTAAGGTTAGATGCGGAAATGAGAACATGAAGTTCAGAACCACAAGTACCGCCAAAGTTAAAAAATGGGTCTCGTCAATTAATTATGCTGGTTTTGGACCCCAAGATGGCTGGTGCCACCCTCATCGCTTCGGTTCTTTTGCACCTCAGAGAGGTTTGAGTGATGATGAAAGCCAAGCTCAGTGGTTCATTGATGGCCGAGCAGCTTTTGAAGCAATCGCATGCTCTATTGAGGCTGCAAAATCAGAGATATTCATCACTGGCTGGTGGCTTTGCCCTGAGCTTTATATGCGACGTCCTTTTCAGAATCATTCTTCTTCACGGCTTGATGCATTACTGGAAACAAAGGCAAAAGAAGGTGTCAAGATTTACATCTTAATGTATAAGGAGGTTCCTATTGCCCTGAAAATTAACAGTATGTATAGTAAGAAGAGGCTTCTAAATATTCATGAGAATGTTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGGATTTACTATTGGTCACATCACGAAAAACTTGTCATCGTTGATCAACACATTTGCTTCATTGGAGGTTTAGATTTATGTTTTGGCCGCTATGATACAATGGAACATAAAGTGAGTGATTTCCCTCCTCTTACATGGCCAGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGACGCAATCAAAGATGAATTGGAGCGGGAGAAGTGTCCTCGAATGCCGTGGCATGATGTACACTGTGCTCTCTGGGGATCTCCATGCCGTGATATTGCTCGACACTTTGTTCAGAGGTGGAACCATGCCAAGAGAAACAAAGCCCCAAATGAAGAAAAAATACCTCTACTTATGCCTCAACATCACATGGTCCTTCCACATTACATGGGAAGAAGCACAGAGTTGAGCTTCGAAAATGAAGACTCAGAGCAAGATCATCAGAAGCTGACTACAGAAGATTTCTTTTCCTCCTTATCACCACAGGAAGATATTCCATTACTTATGCCTCAGGAAGTTGGTGGACTTCCAGTTTCTAACATGGAAACAAATAGCCTTTTCATGAATCACAATTTTTTCAATAAGCCCATGGAGATACAAAGAAGTGTTATGGATTCTTCCCAGGCATACAATGTTGAACCATTGACCCAATTTGATCAAACAAATGGATTGTTAGATGAATTTGGATTTTTGGATGAGTTTGGTGCTTTTGGTCATCCGAGGGAAGCTATTATTGATACTCCGGCATATACGAAAACTTCTGATGATTGGTTGGAAACTGAACACAAAAGCAACCACGTTGTTGCTATAAATGAGGTCAAAGAAATTGGTCCTCTTACTACTTGCAATTGTCAGGTAATAAGAAGTGTCAGCCAGTGGTCAGCAGGAACGAGCAAACCAGAAGCAAGTATCCATGCTGCTTATTGTTCTGCCATTCAAGAGGCGAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCAGGAGATGAGACCATACAAAACCGTGTTCTGGAAGCACTATACCAACGTATATTGCTGGCTCATAAAGAACAACAATGCTTTAGAGTTATTGTTGTTTTACCCCTCTTACCTGGATTCCAGGGTGGTGTAGATGATAATGGTGCAGCAACTGTTCGAGCCTTGATGCATTGGCAGTATCGAACAATAAGTTGGGAAAAAACTTCGATATTGTACCGTCTCAATCTTTTACTCGGTCCTAAAACACAAGATTATATTTTCTTTTGTGGCCTTCGATCATACGGCAGACTTTTTGATGGTGGTCCAATTGCCACAAGTCAGGTATATGTGCACAGCAAATTGATGATTATCGATGATTGTGTTACCTTTATTGGTTCCTCCAATATTAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGGGTAATTATTGAGGATAAAGAGTTCGTTGATTCATCTATGAATGGAAAGCCTTGGAAGGCTGGAAAATTTGCTCATAGTCTACGGTGCTCCTTGTGGTGCGAGCACCTTGGTCTTCATCTTGGAGAGGTCAGTCAAATCATTGATCCTATAGTAGAAGCAACATACAAAGATCTATGGTTAGCTACGGCAAAGGAAAACACAACAATATATGAAGATGTCTTTTCTTGCATCCCCAATGACAACATAAACTCAAGATCGTCTTTACGCCAAAGTTTGGCCGATTTGAAGGGAAAACTTGGTCATAACACAATAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCTATGAAAATGGGGAAGTAAAGATGATAGATCCAATGGAGAGACTGAAGAAGTGTATTAGGGGACATCTTGTCTGTTTTCCATTGAAGTTCATGTGGCAACAAAATCTTAGGCCAGGCTTCATTGAGAGTGAGTTTTATGCTGCCCCTCAAGTTTATCATTGA 3339 41.18 MSTERLIPSDTVPSEAEPPKLASAPPSFRQCGELARVFEELPIASIVSVSRPETGDISPLLLSYTIEIQYKQFKWSLVKKASQVLYLHFALKRRAFIEELHEKQEQVKEWLHNLGIVDHTAVVHHDDESDDGAFSLHDEQTTRNRNVPSVAALPIIKPALGGQRSISDKAKLAMQGYLNHFFGNLDIVNSREVCKFLEVSKMSFVREYGPKLKEGYLMVKHLKQLTGSDSSIKCFACHWCSCCEYNWKKVWAVLKPGFLALVADPMDTKLLDIIVFDVLPTLEEKEGSQACLAYHVKERNPLRYSFKVRCGNENMKFRTTSTAKVKKWVSSINYAGFGPQDGWCHPHRFGSFAPQRGLSDDESQAQWFIDGRAAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFQNHSSSRLDALLETKAKEGVKIYILMYKEVPIALKINSMYSKKRLLNIHENVKVLRSPDHMSTGIYYWSHHEKLVIVDQHICFIGGLDLCFGRYDTMEHKVSDFPPLTWPGKDYYNPRESEPNSWEDAIKDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHHMVLPHYMGRSTELSFENEDSEQDHQKLTTEDFFSSLSPQEDIPLLMPQEVGGLPVSNMETNSLFMNHNFFNKPMEIQRSVMDSSQAYNVEPLTQFDQTNGLLDEFGFLDEFGAFGHPREAIIDTPAYTKTSDDWLETEHKSNHVVAINEVKEIGPLTTCNCQVIRSVSQWSAGTSKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIQNRVLEALYQRILLAHKEQQCFRVIVVLPLLPGFQGGVDDNGAATVRALMHWQYRTISWEKTSILYRLNLLLGPKTQDYIFFCGLRSYGRLFDGGPIATSQVYVHSKLMIIDDCVTFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSSMNGKPWKAGKFAHSLRCSLWCEHLGLHLGEVSQIIDPIVEATYKDLWLATAKENTTIYEDVFSCIPNDNINSRSSLRQSLADLKGKLGHNTIDLGIAAEKIESYENGEVKMIDPMERLKKCIRGHLVCFPLKFMWQQNLRPGFIESEFYAAPQVYH 1112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 62635055 62644242 - Hsped.08g22880.1 Hepe08g2288 578260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2288 1112 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824(InterPro)
Hepe08g2288 1112 CDD PLDc_vPLD1_2_yPLD_like_1 365 509 - -
Hepe08g2288 1112 Gene3D - 209 337 IPR011993 -
Hepe08g2288 1112 FunFam Phospholipase 741 961 - -
Hepe08g2288 1112 SUPERFAMILY PH domain-like 207 337 - -
Hepe08g2288 1112 SMART PH_update 211 339 IPR001849 -
Hepe08g2288 1112 Pfam PLD-like domain 909 954 IPR025202 -
Hepe08g2288 1112 Gene3D Endonuclease Chain A 357 602 - -
Hepe08g2288 1112 ProSiteProfiles PH domain profile. 210 337 IPR001849 -
Hepe08g2288 1112 PIRSF PLD_euk 712 1112 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Hepe08g2288 1112 PIRSF PLD_euk 48 626 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Hepe08g2288 1112 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 472 499 IPR001736 GO:0003824(InterPro)
Hepe08g2288 1112 SUPERFAMILY Phospholipase D/nuclease 325 591 - -
Hepe08g2288 1112 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Hepe08g2288 1112 SUPERFAMILY Phospholipase D/nuclease 747 955 - -
Hepe08g2288 1112 CDD PH_PLD 188 335 - -
Hepe08g2288 1112 Gene3D Endonuclease Chain A 719 968 - -
Hepe08g2288 1112 PANTHER PHOSPHOLIPASE D 191 1090 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Hepe08g2288 1112 MobiDBLite consensus disorder prediction 1 25 - -
Hepe08g2288 1112 Pfam Phospholipase D Active site motif 474 499 IPR001736 GO:0003824(InterPro)
Hepe08g2288 1112 SMART pld_4 472 499 IPR001736 GO:0003824(InterPro)
Hepe08g2288 1112 SMART pld_4 907 934 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2288 Hepe-Chr8:62635055 Hepe10g0187 Hepe-Chr10:1879061 4.60e-34 dispersed
Hepe03g0078 Hepe-Chr3:922707 Hepe08g2288 Hepe-Chr8:62635055 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2288 K01115 - csv:101220522 2079.68