Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2377 ATGGTTGCTCAGAGGAAGGGAGCATCGCGGGTTTCCGAGGAACCCGAGGAGCTAGCAAGAGTTTCGTTGCAGGCTGTTCTTCTTGCCGATAGCTTTACCACTAAGTTTCGTCCCATAACGCTTGAACGCCCCAAGGTATTATTGCCGCTGGTAAACGTCCCGATGATTAATTATACTTTATCTTGGCTCGAATCGGCTGGTGTTGAAGAGGTGTTTGTATTTTGCTGTGCTAATTCGAAGCAAGTAATTGATTATTTGGAGAACTCAGAGTGGGTATCCCTACCAGACTTTGCAGTCACAACTATAGAGTCGCACAACTCCGTTAGTGCTGGAGATGCCCTGCGTTTGATCTATGAAAGAAATGTGATACATGGTGATTTTGTACTTATCACTGGAGACACCATAAGCAACATGTCACTTACGAAAGCTCTTCAACAACACAAAGAGAGAAAGAAGAAAGATAGTAATGCCGTAATGACTATGGTTGTCAAACGGTCAAAGCCTTCTCCAATCACACACCAATCTCGGCTTGGCACTGACGAGCTATTTATGGCAATTGATCATAATACTAAGCAGCTCGTGTACTATGAGGATAAGGCTGACAATTCAAGAGGAATTATACATCTGGACAAGTCATTGCTAGTGGATAATCCTTCCTTATCACTTCATAACGACATGCAGGATTGTTACATAGACATATGCTCCCAAGAAGTACTCAGCCTGTTTACTGACAATTTTGACTACCAACATCTCCGTCGTCATTTTGTCAAGGGTTTGCTCTTAGATGATATCATGGGTTACAAGATTTACACACACGAAATTTGCTCAAGCTATGCAGCTAGAATCGATAATTATCGAAGCTATGACACCGTTAGTAAGGACATAATACAGAGGTGGACTTATCCACTGGTACCAGATGTTAAATTCTTTGGGAATTCTGCTTATAAACTTGAAAGGCAGGGAATGTACAGAGCAACAGAAATACTGCAGGCACGTTCTGCACAGGTTGGTCCGTTTACTGTTATTGGAGATAACAGCAAAATTGGCGACAACACCAAAATTACAAATTCAATTATTGGGCAAGGTTGTAGTATTGGATCAAATGTTACAATTGAAGGCTCTTATATATGGGACAACGTCACCATTGAAGATGGCTGTAAACTTAGTCATGCTATCGTATGTGATGGAGTTATTATAAAGTCGGGAGCAGAACTGGAACCTGGTGTAATTTTGTGTTTCAAGGTTGTTGTAGGGGATCAGTTTGTTGTGCCATCATATTCAATGGTATCTTTGTTTCAGCAGCCAACCAATCAAGATAGCGACGAGGAGCTGGAATATGCAGACAATAGCAGTGGCATTGTAGAATTTGCAGATACAACGGACAAGTCAAATAGTGAACTGATGTCCAAATCGCTGGAAAGGCAAGGCTGGCCTGCATCTGAGCTAGGTAATGGAGGTATAGGATATGTTTGGTCAATTTGTGAAGGAAGTGTTGAAGAAGAATGGAGGCACTCAGTTGCACCCATTCCTGCCGATAAACTTGAGAAGGCTCTGCAAGCGGCAGATGATGAGCTGGAGTTAACTCGAGATGCTAATGTTCTACCACCTTCAGGGGAGTTGAAATCCGACTCCAATATCTCAGATGGTGATGATAACGAGGACTCTAGAGATGACTCCATTCACTTTGAGAAAGAGGTTGAAGCAACGTTTCTGAGGGCTGTGCATGAGAATATTAAGGTGGACAATGTAATTTTGGAAGTTAACTCATTGCGGTTGTCCTATAATAAGGTGGCTGCAGATTGTGCAGGAGCATTATTTTATTCTCTGATGAAATTTGCCTTGGATTCTCCACATGGTTCATCTAGTGAACTACTGCAAAATACTACAAATATAATTACGACATGGAAAAAACTTTTGAAGTACTACCTATCTGACATGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATGTGCCTGGAATCTGCCAAGGAATTCACTCCACATTTTACTAAGATTTTGTGTCATCTATATGACCAAGAAATCATTCAAGAAGAGGCTATTCTGAGGTGGGATGACGAGAAAAAAGAAGCGGATGATTCGGATAAACATTTCGTTAAGCAGGCCGAGAAATTCATTGAAGTGAGAAACTTTATATTTCTGCTTTCTGTTACATTTTCAGATAGAATGAAACTTATATGTATCTTTGGTACAGTGGTTAAGAGTTGCATCAGAGGAGGAAGATGA 2250 40.89 MVAQRKGASRVSEEPEELARVSLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCANSKQVIDYLENSEWVSLPDFAVTTIESHNSVSAGDALRLIYERNVIHGDFVLITGDTISNMSLTKALQQHKERKKKDSNAVMTMVVKRSKPSPITHQSRLGTDELFMAIDHNTKQLVYYEDKADNSRGIIHLDKSLLVDNPSLSLHNDMQDCYIDICSQEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIYTHEICSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNSAYKLERQGMYRATEILQARSAQVGPFTVIGDNSKIGDNTKITNSIIGQGCSIGSNVTIEGSYIWDNVTIEDGCKLSHAIVCDGVIIKSGAELEPGVILCFKVVVGDQFVVPSYSMVSLFQQPTNQDSDEELEYADNSSGIVEFADTTDKSNSELMSKSLERQGWPASELGNGGIGYVWSICEGSVEEEWRHSVAPIPADKLEKALQAADDELELTRDANVLPPSGELKSDSNISDGDDNEDSRDDSIHFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKVAADCAGALFYSLMKFALDSPHGSSSELLQNTTNIITTWKKLLKYYLSDMDEEIEVILKFEEMCLESAKEFTPHFTKILCHLYDQEIIQEEAILRWDDEKKEADDSDKHFVKQAEKFIEVRNFIFLLSVTFSDRMKLICIFGTVVKSCIRGGR 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 64222099 64240638 + Hsped.08g23770.1 Hepe08g2377 578349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2377 749 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 303 IPR029044 -
Hepe08g2377 749 Gene3D Hexapeptide repeat proteins 320 433 - -
Hepe08g2377 749 FunFam Translation initiation factor eIF-2B subunit epsilon 12 303 - -
Hepe08g2377 749 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 715 IPR051956 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0031369(PANTHER)
Hepe08g2377 749 MobiDBLite consensus disorder prediction 528 557 - -
Hepe08g2377 749 SMART 542_3 636 715 IPR003307 GO:0005515(InterPro)
Hepe08g2377 749 FunFam Trimeric LpxA-like enzyme 316 449 - -
Hepe08g2377 749 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058(InterPro)
Hepe08g2377 749 FunFam Translation initiation factor eIF-2B epsilon subunit 552 715 - -
Hepe08g2377 749 CDD LbH_eIF2B_epsilon 341 419 - -
Hepe08g2377 749 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Hepe08g2377 749 Coils Coil 511 531 - -
Hepe08g2377 749 Pfam Bacterial transferase hexapeptide (six repeats) 340 373 IPR001451 -
Hepe08g2377 749 SUPERFAMILY Trimeric LpxA-like enzymes 267 429 IPR011004 -
Hepe08g2377 749 CDD W2_eIF2B_epsilon 557 715 IPR044123 GO:0005085(InterPro)|GO:0031369(InterPro)
Hepe08g2377 749 SUPERFAMILY ARM repeat 562 715 IPR016024 -
Hepe08g2377 749 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Hepe08g2377 749 Gene3D - 549 716 - -
Hepe08g2377 749 Pfam eIF4-gamma/eIF5/eIF2-epsilon 648 715 IPR003307 GO:0005515(InterPro)
Hepe08g2377 749 ProSiteProfiles W2 domain profile. 556 727 IPR003307 GO:0005515(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2377 K03240 - csv:101217025 1298.49