Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g2381 ATGGGATGTATAACTAGCCGAGAGGTAGCTTCTGGAAACTTAGTAGGTTCCGAGGAGAAGAAGGAGAAGAGTTCTGAATGTGGGGATGATTTGGAAAGGAAGGAAGCTGGTGAGGTTGCTGTTGATGTTGCTCAGAAGGATGGGCATGGCCATGGAGTTCAGCCCTTGACGAAAGAGCAGAGAAGAAAGTTGAAACCTAACCCTAGACTGAGTAATTTGCCAAAGCAAACACAGGGGGAGCAGGTGGCGGCTGGATGGCCTCCTTGGCTCACAGCAGTTTGTGGGGAGGCACTCAGTGGTTGGATTCCGAGGAAGGCTGATACGTTTGAGAAGATTGATAAGATTGGACAAGGAACATACAGTAATGTGTACAAAGCAAAAGATCTACTGACCGGTAAAGTTGTTGCGCTGAAGAAGGTTCGATTCGACAATTTAGAGCCAGAAAGTGTAAGATTTATGGCCAGAGAAATTCTCATTTTGCGACGCCTAGATCATCCTAATGTTGTAAAGTTAGAGGGTTTGGTTACATCAAGGATGTCATGTAGTTTGTACCTTGTGTTTGAGTACATGGAGCATGATTTAGCGGGACTTGCTGCAAATCCATCCATCACATTTACAGAGGCTCAGGTTAAGTGTTTCATGCAACAACTTCTATCAGGACTAGAGCATTGTCACAGCCACAGGGTTCTTCATCGTGATATTAAGGGTTCAAATCTTCTTATTAATGGTGAAGGGTTGCTTAAGATTGCTGACTTTGGACTAGCCACTTTCTTTGATCCAAAACACAAGCACCCATTGACTAATCGTGTTGTAACCTTATGGTATCGATCCCCTGAGCTTCTACTTGGTGCAACTCACTATGGTGTAGGCATCGACCTTTGGAGTGCAGGTTGTATTTTAGCAGAGCTATTAGTTGGGAGGCCCATAATGCCCGGCCGTACAGAGGTTGAGCAACTACATAAGATATTCAAGCTGTGTGGCTCACCTTCAGATGAATATTTAAAGAGAGCGAAGTTGCCCAATGCAGCCTTATTTAGGCCCCGAGAACCGTATAAGAGATGCATAAAAGAGACTTTTAAAGATTTCCCAACATCTTCATTTCCTCTTATAGATACACTTCTCGCAATTGATCCCGCTGAGAGAATGACAGCTGCAGATGCATTGAAGAGCGAGTTTTTCACTACAGAACCTTATGCATGTGAACCTTCTAGCCTCCCCAAATATCCACCTAGTAAGGAGATGGATGCTAAACGACGGGATGATGAAGCGCGAAGACAAAGAGCAGCAAGTAAATTGCAGAATGATCGTGTGAAGAAGACTCGCACACGTAACCGTGCTGGTAGGGCCGTTCCTATTCAAGGAGCCAATGCAGAACTCCAATCAAATATTGATAGACGGCGTCTAATTACTCACGCAAATGCAAAGAGCAAGAGCGAAAAGTTTCCCCCTCCACATCAGGACGGGACACTTGGTTTCACATTGGGATATTCACGTCATATTGATCCAGCTGTTGTTCCTTCTGATGTTCCATTTAGTTCCACATCATTTGGCTATCCGAACGAGTTGGACCAAGCGTGGTCCGGTCCATTGGTTCACTCTTCTGACATTGGTGCTGCTCAGAGGCAGAAGCATTTTGGAGGTGATGCAAGAGAACAACAATCAAACCAAACTTCAGTTAAAGGGAAAAAGGCAGCGTGA 1698 44.88 MGCITSREVASGNLVGSEEKKEKSSECGDDLERKEAGEVAVDVAQKDGHGHGVQPLTKEQRRKLKPNPRLSNLPKQTQGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDLLTGKVVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSITFTEAQVKCFMQQLLSGLEHCHSHRVLHRDIKGSNLLINGEGLLKIADFGLATFFDPKHKHPLTNRVVTLWYRSPELLLGATHYGVGIDLWSAGCILAELLVGRPIMPGRTEVEQLHKIFKLCGSPSDEYLKRAKLPNAALFRPREPYKRCIKETFKDFPTSSFPLIDTLLAIDPAERMTAADALKSEFFTTEPYACEPSSLPKYPPSKEMDAKRRDDEARRQRAASKLQNDRVKKTRTRNRAGRAVPIQGANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGTLGFTLGYSRHIDPAVVPSDVPFSSTSFGYPNELDQAWSGPLVHSSDIGAAQRQKHFGGDAREQQSNQTSVKGKKAA 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 64277137 64283034 - Hsped.08g23810.1 Hepe08g2381 578353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g2381 565 MobiDBLite consensus disorder prediction 14 32 - -
Hepe08g2381 565 MobiDBLite consensus disorder prediction 473 493 - -
Hepe08g2381 565 CDD STKc_CDK9_like 109 393 - -
Hepe08g2381 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe08g2381 565 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524(InterPro)
Hepe08g2381 565 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Hepe08g2381 565 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Hepe08g2381 565 Gene3D Transferase(Phosphotransferase) domain 1 192 433 - -
Hepe08g2381 565 MobiDBLite consensus disorder prediction 411 440 - -
Hepe08g2381 565 MobiDBLite consensus disorder prediction 549 565 - -
Hepe08g2381 565 SUPERFAMILY Protein kinase-like (PK-like) 104 398 IPR011009 -
Hepe08g2381 565 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2381 565 MobiDBLite consensus disorder prediction 522 565 - -
Hepe08g2381 565 SMART serkin_6 109 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2381 565 FunFam probable serine/threonine-protein kinase At1g54610 192 433 - -
Hepe08g2381 565 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe08g2381 565 MobiDBLite consensus disorder prediction 44 82 - -
Hepe08g2381 565 MobiDBLite consensus disorder prediction 52 66 - -
Hepe08g2381 565 PANTHER CELL DIVISION PROTEIN KINASE 108 393 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe08g2381 565 MobiDBLite consensus disorder prediction 1 32 - -
Hepe08g2381 565 MobiDBLite consensus disorder prediction 401 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2089 Hepe-Chr7:65183008 Hepe08g2381 Hepe-Chr8:64277137 1.00e-228 dispersed
Hepe07g2488 Hepe-Chr7:69223567 Hepe08g2381 Hepe-Chr8:64277137 9.27e-182 dispersed
Hepe08g0544 Hepe-Chr8:4752757 Hepe08g2381 Hepe-Chr8:64277137 4.55e-180 dispersed
Hepe08g0545 Hepe-Chr8:4760355 Hepe08g2381 Hepe-Chr8:64277137 5.80e-184 dispersed
Hepe08g2381 Hepe-Chr8:64277137 Hepe09g1602 Hepe-Chr9:46187710 3.17e-289 dispersed
Hepe03g0174 Hepe-Chr3:2182525 Hepe08g2381 Hepe-Chr8:64277137 7.05e-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73084 PF00069 Pkinase 7.10E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g2381 K08819 - csv:101217497 1046.19